RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, human

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC130-208	ENST00000588071	FAR2	Q96K12	515 aa		13.53	□□□□□ -0.24
CCDC130-208	ENST00000588071	FRG2B	Q96QU4	278 aa		13.53	□□□□□ -0.24
CCDC130-208	ENST00000588071	ZFYVE21	Q9BQ24	234 aa		13.53	□□□□□ -0.24
CCDC130-208	ENST00000588071	ZNF768	Q9H5H4	540 aa	Known RBP	13.53	□□□□□ -0.24
CCDC130-208	ENST00000588071	FAM60A	Q9NP50	221 aa		13.53	□□□□□ -0.24
CCDC130-208	ENST00000588071	TNFRSF12A	Q9NP84	129 aa		13.53	□□□□□ -0.24
CCDC130-208	ENST00000588071	SEMA5B	Q9P283	1151 aa		13.53	□□□□□ -0.24
CCDC130-208	ENST00000588071	ADGRE2	Q9UHX3	823 aa		13.53	□□□□□ -0.24
CCDC130-208	ENST00000588071	HAO1	Q9UJM8	370 aa		13.53	□□□□□ -0.24
CCDC130-208	ENST00000588071	RIF1	Q5UIP0	2472 aa	Known RBP	13.52	□□□□□ -0.24
CCDC130-208	ENST00000588071	GMNC	A6NCL1	334 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	TMEM233	B4DJY2	109 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	SLCO1B7	G3V0H7	640 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	EDF1	O60869	148 aa	Known RBP	13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	CTSV	O60911	334 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	ANKRD34C	P0C6C1	535 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	NELFE	P18615	380 aa	Known RBP	13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	CSTF2	P33240	577 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	AHR	P35869	848 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	BCL6	P41182	706 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	SCTR	P47872	440 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	NEK2	P51955	445 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	ZFP36L1	Q07352	338 aa	Known RBP	13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	MCAT	Q8IVS2	390 aa	Known RBP	13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	SLITRK4	Q8IW52	837 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	WDR75	Q8IWA0	830 aa	Known RBP	13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	DDIAS	Q8IXT1	998 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	D2HGDH	Q8N465	521 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	CHCHD4	Q8N4Q1	142 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	DNAJC22	Q8N4W6	341 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	PRR11	Q96HE9	360 aa	Predicted RBP	13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	SLC41A2	Q96JW4	573 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	FCRL4	Q96PJ5	515 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	SARG	Q9BW04	601 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	STRADB	Q9C0K7	418 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	CHRNA10	Q9GZZ6	450 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	PFDN4	Q9NQP4	134 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	FGFR1OP2	Q9NVK5	253 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	VTI1B	Q9UEU0	232 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	PILRA	Q9UKJ1	303 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	PLCL2	Q9UPR0	1127 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	BTRC	Q9Y297	605 aa		13.52	□□□□□ -0.25
CCDC130-208	ENST00000588071	PTPRZ1	P23471	2315 aa	Predicted RBP	13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071		H0YGG7	62 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	SKAP2	O75563	359 aa	Predicted RBP	13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	KCNK5	O95279	499 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	MT-CO3	P00414	261 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	PDYN	P01213	254 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	EIF2S1	P05198	315 aa	Known RBP	13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	GSTM2	P28161	218 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	SERPINB1	P30740	379 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	HK2	P52789	917 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	VSX2	P58304	361 aa	Predicted RBP	13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	ARF3	P61204	181 aa	Predicted RBP	13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	CYP4F2	P78329	520 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	KCNAB1	Q14722	419 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	ABRAXAS2	Q15018	415 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	PDCD2	Q16342	344 aa	Predicted RBP	13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	C10orf62	Q5T681	223 aa	Predicted RBP	13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	FAM219B	Q5XKK7	198 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	SCIMP	Q6UWF3	145 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	RNF44	Q7L0R7	432 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	B3GNT8	Q7Z7M8	397 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	ZNF655	Q8N720	491 aa	Predicted RBP	13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	TRPV3	Q8NET8	790 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	HUS1B	Q8NHY5	278 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	WDR20	Q8TBZ3	569 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	TWIST2	Q8WVJ9	160 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	SLC13A3	Q8WWT9	602 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	FAM122A	Q96E09	287 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	SEC16B	Q96JE7	1060 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	DEPDC7	Q96QD5	511 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	MTERF1	Q99551	399 aa	Known RBP	13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	RTKN	Q9BST9	563 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	RHBG	Q9H310	441 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	FANCE	Q9HB96	536 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	IRAK4	Q9NWZ3	460 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	ZFP69B	Q9UJL9	534 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	TSC22D4	Q9Y3Q8	395 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	PCDHGA4	Q9Y5G9	962 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	DNAJC15	Q9Y5T4	150 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	AP1M2	Q9Y6Q5	423 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	KIF26B	Q2KJY2	2108 aa		13.51	□□□□□ -0.25
CCDC130-208	ENST00000588071	LAMA1	P25391	3075 aa		13.5	□□□□□ -0.25
CCDC130-208	ENST00000588071	LOC105369274	A0A096LPK9	316 aa		13.5	□□□□□ -0.25
CCDC130-208	ENST00000588071	LOC102723532	A0A0G2JNH3	316 aa		13.5	□□□□□ -0.25
CCDC130-208	ENST00000588071	TRPC5OS	A6NMA1	111 aa		13.5	□□□□□ -0.25
CCDC130-208	ENST00000588071	SLC28A1	O00337	649 aa		13.5	□□□□□ -0.25
CCDC130-208	ENST00000588071	SRPX2	O60687	465 aa	Predicted RBP	13.5	□□□□□ -0.25
CCDC130-208	ENST00000588071	TGFB1	P01137	390 aa		13.5	□□□□□ -0.25
CCDC130-208	ENST00000588071	STATH	P02808	62 aa		13.5	□□□□□ -0.25
CCDC130-208	ENST00000588071	LINC00032	P0C843	101 aa		13.5	□□□□□ -0.25
CCDC130-208	ENST00000588071	TROVE2	P10155	538 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
CCDC130-208	ENST00000588071	CCKBR	P32239	447 aa		13.5	□□□□□ -0.25
CCDC130-208	ENST00000588071	PIK3CB	P42338	1070 aa		13.5	□□□□□ -0.25
CCDC130-208	ENST00000588071	SEC24C	P53992	1094 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms