RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 OR4E2Q8NGC2 313 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 JPH3Q8WXH2 748 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-204ENST00000587339 TRIM8Q9BZR9 551 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 PCED1AQ9H1Q7 454 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 RHBGQ9H310 441 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 NANOGQ9H9S0 305 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 CMTM6Q9NX76 183 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 C15orf38-AP3S2A0A0A6YYH1 394 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 GNG14A0A1W2PPG7 69 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 FEZF1A0PJY2 475 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 SAP18O00422 153 aaKnown RBP19.06■□□□□ 0.64
TRIM47-204ENST00000587339 PRICKLE3O43900 615 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-204ENST00000587339 DCNP07585 359 aaKnown RBP19.06■□□□□ 0.64
TRIM47-204ENST00000587339 CTSEP14091 401 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 TIA1P31483 386 aaKnown RBP eCLIP19.06■□□□□ 0.64
TRIM47-204ENST00000587339 BLKP51451 505 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 CSNK1G2P78368 415 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 RPL6Q02878 288 aaKnown RBP19.06■□□□□ 0.64
TRIM47-204ENST00000587339 PGS1Q32NB8 556 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 ARMCX6Q7L4S7 300 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 VN1R5Q7Z5H4 357 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 ARPINQ7Z6K5 226 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 BHLHE22Q8NFJ8 381 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-204ENST00000587339 CDC26Q8NHZ8 85 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 PYDC1Q8WXC3 89 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 GTF2H4Q92759 462 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 TMEM125Q96AQ2 219 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 PCDHAC1Q9H158 963 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 MRPS30Q9NP92 439 aaKnown RBP19.06■□□□□ 0.64
TRIM47-204ENST00000587339 TAAR2Q9P1P5 351 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 IGKV1-8A0A0C4DH67 115 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 AKAP10O43572 662 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 PCDH7O60245 1069 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 ASMTP46597 345 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 CXCL12P48061 93 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 ABATP80404 500 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 DPY19L1Q2PZI1 675 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 SPATS1Q496A3 300 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 IYDQ6PHW0 289 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 COMMD6Q7Z4G1 85 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 GPR180Q86V85 440 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 DCP2Q8IU60 420 aaKnown RBP19.05■□□□□ 0.64
TRIM47-204ENST00000587339 TRIM48Q8IWZ4 208 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 PPM1MQ96MI6 270 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 SRMSQ9H3Y6 488 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 NT5DC2Q9H857 520 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 S100A14Q9HCY8 104 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 SIRT5Q9NXA8 310 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 SPHK1Q9NYA1 384 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 STOML1Q9UBI4 398 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 LRP4O75096 1905 aa19.05■□□□□ 0.64
TRIM47-204ENST00000587339 SERPINB1P30740 379 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 SESN3P58005 492 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 CYP4F2P78329 520 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 SLC34A1Q06495 639 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 TRAP1Q12931 704 aaKnown RBP19.04■□□□□ 0.64
TRIM47-204ENST00000587339 MFSD2AQ8NA29 543 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 OR2L3Q8NG85 312 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 STARD8Q92502 1023 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 SPACA7Q96KW9 195 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 CGREF1Q99674 301 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 RMND5AQ9H871 391 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 THEGQ9P2T0 379 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 OR1F1O43749 312 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 CHRM5P08912 532 aaPredicted RBP19.04■□□□□ 0.64
TRIM47-204ENST00000587339 HSD17B1P14061 328 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 CD38P28907 300 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 PEBP1P30086 187 aaKnown RBP19.04■□□□□ 0.64
TRIM47-204ENST00000587339 GRK3P35626 688 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 KIR3DL1P43629 444 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 PHC1P78364 1004 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 PLCL1Q15111 1095 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 TAF8Q7Z7C8 310 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 METTL4Q8N3J2 472 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 ALG2Q9H553 416 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 MUTYHQ9UIF7 546 aa19.04■□□□□ 0.64
TRIM47-204ENST00000587339 ISM1B1AKI9 464 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 CCNDBP1O95273 360 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 STAMBPO95630 424 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 VIPP01282 170 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 COX7A2P14406 83 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 ANPEPP15144 967 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 MAOBP27338 520 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 C21orf58P58505 322 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 SRSF11Q05519 484 aaKnown RBP19.03■□□□□ 0.64
TRIM47-204ENST00000587339 UGT8Q16880 541 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 HKDC1Q2TB90 917 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 FAM20CQ8IXL6 584 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 DNAJB8Q8NHS0 232 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 APOBEC3BQ9UH17 382 aaKnown RBP19.03■□□□□ 0.64
TRIM47-204ENST00000587339 ANGPTL2Q9UKU9 493 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 MAPRE3Q9UPY8 281 aa19.03■□□□□ 0.64
TRIM47-204ENST00000587339 DNAH14Q0VDD8 3507 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 AXIN1O15169 862 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 MAP3K13O43283 966 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 GBAP04062 536 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 CELA2BP08218 269 aaPredicted RBP19.02■□□□□ 0.64
TRIM47-204ENST00000587339 CMPK1P30085 196 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 ZNF763Q0D2J5 394 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 KHDRBS2Q5VWX1 349 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms