RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PLD3Q8IV08 490 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 LAS2Q8IYD9 372 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 ZNF781Q8N8C0 355 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 MFSD9Q8NBP5 474 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 AGBL5Q8NDL9 886 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 ZNF740Q8NDX6 193 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 SEC16BQ96JE7 1060 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 C7orf26Q96N11 449 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 SPNS1Q9H2V7 528 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 FANCEQ9HB96 536 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 FAM60AQ9NP50 221 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 ZDHHC2Q9UIJ5 367 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 PILRAQ9UKJ1 303 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 PLCL2Q9UPR0 1127 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 CLCA2Q9UQC9 943 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 FIS1Q9Y3D6 152 aa17.54■□□□□ 0.4
RFFL-211ENST00000584541 KCNE1BA0A087WTH5 132 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 NRP2O60462 931 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 PRAMEF10O60809 474 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 CSO75390 466 aaKnown RBP17.53■□□□□ 0.4
RFFL-211ENST00000584541 BCL6P41182 706 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 SCTRP47872 440 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 ACY1Q03154 408 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 ISXQ2M1V0 245 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 FRG2Q64ET8 278 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 CLEC6AQ6EIG7 209 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 FBXO42Q6P3S6 717 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 FAM47EQ6ZV65 393 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 DNAJC22Q8N4W6 341 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 ZNF655Q8N720 491 aaPredicted RBP17.53■□□□□ 0.4
RFFL-211ENST00000584541 TRPV3Q8NET8 790 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 OR7G3Q8NG95 312 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 SELENOMQ8WWX9 145 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 CCT6BQ92526 530 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 FAR2Q96K12 515 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 FRG2BQ96QU4 278 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 KCNA7Q96RP8 456 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 CMKLR1Q99788 373 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 NLNQ9BYT8 704 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 PFDN4Q9NQP4 134 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 ZFP69BQ9UJL9 534 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 HAO1Q9UJM8 370 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 ZNF490Q9ULM2 529 aaPredicted RBP17.53■□□□□ 0.4
RFFL-211ENST00000584541 TSC22D4Q9Y3Q8 395 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 TIMM22Q9Y584 194 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 PCDHGA4Q9Y5G9 962 aa17.53■□□□□ 0.4
RFFL-211ENST00000584541 SLCO1B7G3V0H7 640 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 LCMT2O60294 686 aaKnown RBP17.52■□□□□ 0.4
RFFL-211ENST00000584541 SRPX2O60687 465 aaPredicted RBP17.52■□□□□ 0.4
RFFL-211ENST00000584541 ULK1O75385 1050 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 VIMP08670 466 aaKnown RBP17.52■□□□□ 0.4
RFFL-211ENST00000584541 MSL3P1P0C860 447 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 HK2P52789 917 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 PDX1P52945 283 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 ZNF33BQ06732 778 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 DDX39BQ13838 428 aaKnown RBP17.52■□□□□ 0.4
RFFL-211ENST00000584541 KCNAB1Q14722 419 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 KANK2Q63ZY3 851 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 ATG14Q6ZNE5 492 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 MCATQ8IVS2 390 aaKnown RBP17.52■□□□□ 0.4
RFFL-211ENST00000584541 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.52■□□□□ 0.4
RFFL-211ENST00000584541 PIWIL2Q8TC59 973 aaKnown RBP17.52■□□□□ 0.4
RFFL-211ENST00000584541 RHBGQ9H310 441 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 TNFRSF12AQ9NP84 129 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 SLCO1B3Q9NPD5 702 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 IRAK4Q9NWZ3 460 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 AP1M2Q9Y6Q5 423 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 GVINP1Q7Z2Y8 2422 aa17.52■□□□□ 0.4
RFFL-211ENST00000584541 WDR87Q6ZQQ6 2873 aa17.52■□□□□ 0.39
RFFL-211ENST00000584541 MANBAO00462 879 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 TXNDC9O14530 226 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 SERPIND1P05546 499 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 SLC35G6P0C7Q6 338 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 PTPRZ1P23471 2315 aaPredicted RBP17.51■□□□□ 0.39
RFFL-211ENST00000584541 PIK3CBP42338 1070 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 FOXA1P55317 472 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 GNGT1P63211 74 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 CYP4F2P78329 520 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 C16orf72Q14CZ0 275 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 DEFB110Q30KQ9 67 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 SGO1Q5FBB7 561 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 ASPGQ86U10 573 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 TMPRSS12Q86WS5 348 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 CACTIN-AS1Q8N1I8 211 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 ANKRD53Q8N9V6 530 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 CAMKVQ8NCB2 501 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 HUS1BQ8NHY5 278 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 WDR20Q8TBZ3 569 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 MTFMTQ96DP5 389 aaKnown RBP17.51■□□□□ 0.39
RFFL-211ENST00000584541 LIN37Q96GY3 246 aaPredicted RBP17.51■□□□□ 0.39
RFFL-211ENST00000584541 FCRL4Q96PJ5 515 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 OR2A5Q96R48 311 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 PNPOQ9NVS9 261 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 SERTAD3Q9UJW9 196 aa17.51■□□□□ 0.39
RFFL-211ENST00000584541 DCDC2BA2VCK2 349 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 EFCAB7A8K855 629 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 TMEM233B4DJY2 109 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 TMEM150CB9EJG8 249 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 H0YGG7 62 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 NDUFS4O43181 175 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms