RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 CYP4X1Q8N118 509 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 ARHGEF39Q8N4T4 335 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 OR51Q1Q8NH59 317 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 ELP5Q8TE02 316 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 LRRC46Q96FV0 321 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 LPAR4Q99677 370 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 MACROD1Q9BQ69 325 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 ZNF670Q9BS34 389 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 DPH7Q9BTV6 452 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 TTTY12Q9BZ98 90 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 AMBRA1Q9C0C7 1298 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 EPB41L4BQ9H329 900 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 SLC39A10Q9ULF5 831 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 SCINQ9Y6U3 715 aa13.09□□□□□ -0.31
CSNK1D-213ENST00000580446 IGLV3-16A0A075B6K0 115 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 HSPB2A8KAH6 182 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 WDR1O75083 606 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 CDK11BP21127 795 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 ENDOUP21128 410 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 ACRV1P26436 265 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 TRHRP34981 398 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 BDKRB1P46663 353 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 OR4D2P58180 307 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 TAS2R40P59535 323 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 NSDHLQ15738 373 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 HSPB2Q16082 182 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 ACKR1Q16570 336 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 DBN1Q16643 649 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 WLSQ5T9L3 541 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 BHLHB9Q6PI77 547 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 KIAA0408Q6ZU52 694 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 SNX20Q7Z614 316 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 KIF18BQ86Y91 864 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 PLD3Q8IV08 490 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 PIANPQ8IYJ0 282 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 TMEM251Q8N6I4 163 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 MVB12AQ96EY5 273 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 EXO5Q9H790 373 aa13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 RUVBL2Q9Y230 463 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-213ENST00000580446 OR2A25A4D2G3 310 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 SH3D21A4FU49 640 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 OR14I1A6ND48 311 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 SGK494L7N484 410 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 ACOT7O00154 380 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 CD5LO43866 347 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 KDM1AO60341 852 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 TNNT3P45378 269 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 MAN2A2P49641 1150 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 ZNF136P52737 540 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 DYNLT1P63172 113 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 HYAL2Q12891 473 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 VEZF1Q14119 521 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 PIGHQ14442 188 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 TAF1AQ15573 450 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 TEX44Q53QW1 395 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 IRF2BP2Q7Z5L9 587 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 NEK11Q8NG66 645 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 OR2M7Q8NG81 312 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 RAPGEF5Q92565 580 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 FAF2Q96CS3 445 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 TEKT5Q96M29 485 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 CCDC138Q96M89 665 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 GSX2Q9BZM3 304 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 LIN28AQ9H9Z2 209 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 LRTM1Q9HBL6 345 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 ANAPC7Q9UJX3 599 aa13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 EIF3LQ9Y262 564 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-213ENST00000580446 ABCA1O95477 2261 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 ZNF860A6NHJ4 632 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 C2orf81A6NN90 581 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 A8MUA0 341 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 A8MV72 311 aaPredicted RBP13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 IL1RNP18510 177 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 RHAGQ02094 409 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 KRT31Q15323 416 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 DCUN1D3Q8IWE4 304 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 TMEM156Q8N614 296 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 OR2A1Q8NGT9 310 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 LKAAEAR1Q8TD35 194 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 ROBO4Q8WZ75 1007 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 LDAHQ9H6V9 325 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 TSR3Q9UJK0 312 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 CDC42EP3Q9UKI2 254 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 ATP6V1DQ9Y5K8 247 aa13.06□□□□□ -0.32
CSNK1D-213ENST00000580446 A0A1W2PPV9 198 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 FEZF1A0PJY2 475 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 AQP7O14520 342 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 FCHO1O14526 889 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 IGHG3P01860 377 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 TUBB4AP04350 444 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 FERP16591 822 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 ARHGAP25P42331 645 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 AVPR1BP47901 424 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 AGTR2P50052 363 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 ZNF140P52738 457 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 HSPA14Q0VDF9 509 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 WASHC5Q12768 1159 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 TSTA3Q13630 321 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 DPCR1Q3MIW9 517 aa13.05□□□□□ -0.32
CSNK1D-213ENST00000580446 ZNF571Q7Z3V5 609 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms