RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 DPM1O60762 260 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 NSA2O95478 260 aaKnown RBP14.1□□□□□ -0.15
SS18-212ENST00000579061 BCL6P41182 706 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 AVPR1BP47901 424 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 ATP6V0D1P61421 351 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 TLE1Q04724 770 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 KLC1Q07866 573 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 AIMP2Q13155 320 aaKnown RBP14.1□□□□□ -0.15
SS18-212ENST00000579061 MYBPC3Q14896 1274 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 TSNQ15631 228 aaKnown RBP14.1□□□□□ -0.15
SS18-212ENST00000579061 ZKSCAN8Q15776 578 aaPredicted RBP14.1□□□□□ -0.15
SS18-212ENST00000579061 RBBP7Q16576 425 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 GLE1Q53GS7 698 aaKnown RBP14.1□□□□□ -0.15
SS18-212ENST00000579061 CDKL4Q5MAI5 379 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 VWA5B1Q5TIE3 1220 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 KIRREL2Q6UWL6 708 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 FRA10AC1Q70Z53 315 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 ASPGQ86U10 573 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 RELL1Q8IUW5 271 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 TMEM151BQ8IW70 566 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 KLHDC8AQ8IYD2 350 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 GALNT16Q8N428 558 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 PPM1NQ8N819 430 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 AMER3Q8N944 861 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 MFSD9Q8NBP5 474 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 FBF1Q8TES7 1133 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 SLC13A3Q8WWT9 602 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 SLC5A11Q8WWX8 675 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 ZNF592Q92610 1267 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 CRB3Q9BUF7 120 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 NUDT9Q9BW91 350 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 TSPYL1Q9H0U9 437 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 EPN3Q9H201 632 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 PELI2Q9HAT8 420 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 TRPC4Q9UBN4 977 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 DYRK1BQ9Y463 629 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 KCNE2Q9Y6J6 123 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 A0A0A6YYC8 382 aaPredicted RBP14.09□□□□□ -0.15
SS18-212ENST00000579061 CTAGE15A4D2H0 777 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 I3L1I5 382 aaPredicted RBP14.09□□□□□ -0.15
SS18-212ENST00000579061 IPO13O94829 963 aaKnown RBP14.09□□□□□ -0.15
SS18-212ENST00000579061 WISP1O95388 367 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 CYC1P08574 325 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 SLC35G6P0C7Q6 338 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 CTAGE8P0CG41 777 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 CCDC166P0CW27 439 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 CSRP3P50461 194 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 RAB10P61026 200 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 PWP1Q13610 501 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 CSHL1Q14406 222 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 TUBB8Q3ZCM7 444 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 VWA2Q5GFL6 755 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 TMEM214Q6NUQ4 689 aaKnown RBP14.09□□□□□ -0.15
SS18-212ENST00000579061 CTAGE6Q86UF2 777 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 THOC6Q86W42 341 aaKnown RBP14.09□□□□□ -0.15
SS18-212ENST00000579061 CTAGE4Q8IX94 777 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 TCAIMQ8N3R3 496 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 NEIL2Q969S2 332 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 RHBDF1Q96CC6 855 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 UBXN10Q96LJ8 280 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 EGFL8Q99944 293 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 CAB39LQ9H9S4 337 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 MTRF1LQ9UGC7 380 aaKnown RBP14.09□□□□□ -0.15
SS18-212ENST00000579061 C3orf18Q9UK00 162 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 FBXL4Q9UKA2 621 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 SLC22A7Q9Y694 548 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 NBASA2RRP1 2371 aa14.09□□□□□ -0.15
SS18-212ENST00000579061 CNTRLQ7Z7A1 2325 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 A0A1W2PQ72 361 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 FEZF1A0PJY2 475 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 A6NL46 340 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 PHGDHO43175 533 aaKnown RBP14.08□□□□□ -0.16
SS18-212ENST00000579061 ALPPP05187 535 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 CD1DP15813 335 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 PHBP35232 272 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 AHRP35869 848 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 GGT5P36269 586 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 SLC6A12P48065 614 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 TGFBIQ15582 683 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 ATG9BQ674R7 924 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 NIPAL1Q6NVV3 410 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 SHISA6Q6ZSJ9 500 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 CCDC91Q7Z6B0 441 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 OR11G2Q8NGC1 345 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 KIF18AQ8NI77 898 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 AIF1LQ9BQI0 150 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 ZNF552Q9H707 407 aaPredicted RBP14.08□□□□□ -0.16
SS18-212ENST00000579061 DMGDHQ9UI17 866 aaKnown RBP14.08□□□□□ -0.16
SS18-212ENST00000579061 SLC22A14Q9Y267 594 aa14.08□□□□□ -0.16
SS18-212ENST00000579061 MRPS2Q9Y399 296 aaKnown RBP14.08□□□□□ -0.16
SS18-212ENST00000579061 TENM4Q6N022 2769 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 IDSB3KWA1 339 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 MAP2K7O14733 419 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 OR1F1O43749 312 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 HPP00738 406 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 ACPPP15309 386 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 CRABP2P29373 138 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 SCTRP47872 440 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 EMP2P54851 167 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 SKP1P63208 163 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms