RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 IGHEP01854 428 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 ZGLP1P0C6A0 271 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 CD1DP15813 335 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 ECHS1P30084 290 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 GRK3P35626 688 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 GMPRP36959 345 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 SLC26A3P40879 764 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 SLC6A12P48065 614 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 CCR8P51685 355 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 PGDP52209 483 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 OCA2Q04671 838 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 KLC1Q07866 573 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 SLMAPQ14BN4 828 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 TGFBIQ15582 683 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 NDUFA9Q16795 377 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 GLE1Q53GS7 698 aaKnown RBP12.38□□□□□ -0.43
CNOT1-220ENST00000569916 VWA2Q5GFL6 755 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 CATSPEREQ5SY80 951 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 TMEM214Q6NUQ4 689 aaKnown RBP12.38□□□□□ -0.43
CNOT1-220ENST00000569916 PRSS41Q7RTY9 318 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 CMC1Q7Z7K0 106 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 ASPGQ86U10 573 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 THOC6Q86W42 341 aaKnown RBP12.38□□□□□ -0.43
CNOT1-220ENST00000569916 RELL1Q8IUW5 271 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 KLHDC8AQ8IYD2 350 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 PRSS58Q8IYP2 241 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 MFSD9Q8NBP5 474 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 KIF18AQ8NI77 898 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 SLC5A11Q8WWX8 675 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 MIEF2Q96C03 454 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 RHBDF1Q96CC6 855 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 TRIM44Q96DX7 344 aaPredicted RBP12.38□□□□□ -0.43
CNOT1-220ENST00000569916 UBXN10Q96LJ8 280 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 FER1L6-AS2Q96M78 137 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 TSNARE1Q96NA8 513 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 MACROD1Q9BQ69 325 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 CRB3Q9BUF7 120 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 TRIM4Q9C037 500 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 EPN3Q9H201 632 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 SEMA3GQ9NS98 782 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 NINJ2Q9NZG7 142 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 TRPC4Q9UBN4 977 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 MTRF1LQ9UGC7 380 aaKnown RBP12.38□□□□□ -0.43
CNOT1-220ENST00000569916 SPENQ96T58 3664 aaKnown RBP12.38□□□□□ -0.43
CNOT1-220ENST00000569916 SCN3AQ9NY46 2000 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 SPTA1P02549 2419 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 HELZ2Q9BYK8 2649 aaKnown RBP12.37□□□□□ -0.43
CNOT1-220ENST00000569916 TRBC2A0A5B9 178 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 NCF1BA6NI72 391 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-220ENST00000569916 A6NL46 340 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 NCF1CA8MVU1 366 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-220ENST00000569916 PYCARD-AS1I3L0S3 204 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 NSA2O95478 260 aaKnown RBP12.37□□□□□ -0.43
CNOT1-220ENST00000569916 SLC35E2BP0CK96 405 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 NCF1P14598 390 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-220ENST00000569916 CASRP41180 1078 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 HNMTP50135 292 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 ATP6V0D1P61421 351 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 REEP5Q00765 189 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 KLRB1Q12918 225 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 CSHL1Q14406 222 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 OR4D1Q15615 310 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 RBBP7Q16576 425 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 SYT16Q17RD7 645 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 C18orf21Q32NC0 220 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-220ENST00000569916 COLEC12Q5KU26 742 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 KIRREL2Q6UWL6 708 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 TMPRSS11BQ86T26 416 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 CLEC1AQ8NC01 280 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 KCT2Q8NC54 265 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 CAMKVQ8NCB2 501 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 ZNF740Q8NDX6 193 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 OR9A4Q8NGU2 314 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 ZCCHC10Q8TBK6 192 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 SLC13A3Q8WWT9 602 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 FMO2Q99518 471 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 MESP1Q9BRJ9 268 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 TMEM79Q9BSE2 394 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 CDC42EP4Q9H3Q1 356 aaKnown RBP12.37□□□□□ -0.43
CNOT1-220ENST00000569916 ACSS3Q9H6R3 686 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 PELI2Q9HAT8 420 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 MKKSQ9NPJ1 570 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-220ENST00000569916 C14orf105Q9NVL8 296 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 GPR83Q9NYM4 423 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 FBXL4Q9UKA2 621 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 SLC22A14Q9Y267 594 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 DYRK1BQ9Y463 629 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 MAP4K5Q9Y4K4 846 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 DOCK10Q96BY6 2186 aa12.37□□□□□ -0.43
CNOT1-220ENST00000569916 HMX2A2RU54 273 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 H0YIG0 161 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 TAPBPO15533 448 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 OR1F1O43749 312 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 ALOX12BO75342 701 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 WDR47O94967 919 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 SLC35G6P0C7Q6 338 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 IL1RNP18510 177 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 PHBP35232 272 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 GDF5P43026 501 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 SCTRP47872 440 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms