RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TSR3Q9UJK0 312 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 TFR2Q9UP52 801 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 PCDHA13Q9Y5I0 950 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 MAP1AP78559 2803 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 ACANP16112 2415 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 ZNF839A8K0R7 811 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 ARHGEF33A8MVX0 844 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 AKR1B15C9JRZ8 316 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 E7EVH7 732 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 CD3EAPO15446 510 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 NME2P1O60361 137 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 MAN1A2O60476 641 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 NDUFS3O75489 264 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 FAM155BO75949 473 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 NME2P22392 152 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 MSX1P28360 303 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 CHRNB4P30926 498 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 PTGS2P35354 604 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 GRIA1P42261 906 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 XCR1P46094 333 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 PNLIPRP1P54315 467 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 EIF3BP55884 814 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 ABATP80404 500 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 TFF3Q07654 80 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 GBX1Q14549 363 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 SPA17Q15506 151 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 RNFT1Q5M7Z0 435 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 CES4AQ5XG92 561 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 PAPD4Q6PIY7 484 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 PCGF5Q86SE9 256 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 CD163Q86VB7 1156 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 DMRTC2Q8IXT2 367 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 CPSF7Q8N684 471 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 PPHLN1Q8NEY8 458 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 SLC35B2Q8TB61 432 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 FAM57AQ8TBR7 257 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 LPAR4Q99677 370 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 FOXC2Q99958 501 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 CXXC4Q9H2H0 198 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 FAM114A2Q9NRY5 505 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 KCNN3Q9UGI6 736 aa11.11□□□□□ -0.63
GTF3C1-209ENST00000568569 INTS1Q8N201 2190 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 FAM90A27PA6NNH2 459 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 NDC80O14777 642 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 HAT1O14929 419 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 TFECO14948 347 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 PSIP1O75475 530 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 TPOP07202 933 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 PTGER1P34995 402 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 FDFT1P37268 417 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 BCL6P41182 706 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 IST1P53990 364 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 PPP2R2AP63151 447 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 SNRPNP63162 240 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 ACTN3Q08043 901 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 ABRAXAS2Q15018 415 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 NSDHLQ15738 373 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 SFT2D3Q587I9 215 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 CTSL3PQ5NE16 218 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 TMEM211Q6ICI0 200 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 CEP128Q6ZU80 1094 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 PRSS41Q7RTY9 318 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 TGIF2LYQ8IUE0 185 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 PLD3Q8IV08 490 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 MARVELD2Q8N4S9 558 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 POGLUT1Q8NBL1 392 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 LILRB4Q8NHJ6 448 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 NINJ1Q92982 152 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 TMEM125Q96AQ2 219 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 EBNA1BP2Q99848 306 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 ETNK1Q9HBU6 452 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 SLC24A3Q9HC58 644 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 KCNJ16Q9NPI9 418 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 HCN3Q9P1Z3 774 aa11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-209ENST00000568569 A0A1B0GTH9 108 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 NKX2-6A6NCS4 301 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 OR2W5A6NFC9 320 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 H3BMM5 538 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 SMAPO00193 183 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 KIF5CO60282 957 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 TOXO94900 526 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 ZWINTO95229 277 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 SLC16A8O95907 504 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 STATHP02808 62 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 CATP04040 527 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 HOXD4P09016 255 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 DRD2P14416 443 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 IL1RNP18510 177 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 CYB561P49447 251 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 NAP1L1P55209 391 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 SLC26A5P58743 744 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 FOLH1Q04609 750 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 MYBPHQ13203 477 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 KLF1Q13351 362 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 USP10Q14694 798 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 MEI1Q5TIA1 1274 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 ZNF468Q5VIY5 522 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 TMEM214Q6NUQ4 689 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms