RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 ADGRE2Q9UHX3 823 aa29.31■■■□□ 2.28
CTCF-203ENST00000566078 POMT2Q9UKY4 750 aa29.31■■■□□ 2.28
CTCF-203ENST00000566078 LCMT2O60294 686 aaKnown RBP29.31■■■□□ 2.28
CTCF-203ENST00000566078 HOXB3P14651 431 aaPredicted RBP29.31■■■□□ 2.28
CTCF-203ENST00000566078 ENGP17813 658 aa29.31■■■□□ 2.28
CTCF-203ENST00000566078 BCL6P41182 706 aa29.31■■■□□ 2.28
CTCF-203ENST00000566078 SCTRP47872 440 aa29.31■■■□□ 2.28
CTCF-203ENST00000566078 TCEAL6Q6IPX3 200 aa29.31■■■□□ 2.28
CTCF-203ENST00000566078 TBC1D19Q8N5T2 526 aa29.31■■■□□ 2.28
CTCF-203ENST00000566078 TCEAL3Q969E4 200 aa29.31■■■□□ 2.28
CTCF-203ENST00000566078 PPM1MQ96MI6 270 aa29.31■■■□□ 2.28
CTCF-203ENST00000566078 KHNYNO15037 678 aaKnown RBP29.3■■■□□ 2.28
CTCF-203ENST00000566078 GLB1P16278 677 aa29.3■■■□□ 2.28
CTCF-203ENST00000566078 ADSLP30566 484 aaPredicted RBP29.3■■■□□ 2.28
CTCF-203ENST00000566078 LSSP48449 732 aa29.3■■■□□ 2.28
CTCF-203ENST00000566078 NME5P56597 212 aa29.3■■■□□ 2.28
CTCF-203ENST00000566078 RPS6KA2Q15349 733 aa29.3■■■□□ 2.28
CTCF-203ENST00000566078 IL23RQ5VWK5 629 aa29.3■■■□□ 2.28
CTCF-203ENST00000566078 MIER2Q8N344 545 aa29.3■■■□□ 2.28
CTCF-203ENST00000566078 ABCG4Q9H172 646 aa29.3■■■□□ 2.28
CTCF-203ENST00000566078 ANKMY1Q9P2S6 941 aa29.3■■■□□ 2.28
CTCF-203ENST00000566078 EIF3LQ9Y262 564 aaKnown RBP29.3■■■□□ 2.28
CTCF-203ENST00000566078 GPR45Q9Y5Y3 372 aa29.3■■■□□ 2.28
CTCF-203ENST00000566078 RP1P56715 2156 aa29.29■■■□□ 2.28
CTCF-203ENST00000566078 TNFSF14O43557 240 aa29.29■■■□□ 2.28
CTCF-203ENST00000566078 TGFB1P01137 390 aa29.29■■■□□ 2.28
CTCF-203ENST00000566078 NAA25Q14CX7 972 aa29.29■■■□□ 2.28
CTCF-203ENST00000566078 KIAA0040Q15053 153 aa29.29■■■□□ 2.28
CTCF-203ENST00000566078 FIGLAQ6QHK4 219 aa29.29■■■□□ 2.28
CTCF-203ENST00000566078 KLHL25Q9H0H3 589 aa29.29■■■□□ 2.28
CTCF-203ENST00000566078 NMRK1Q9NWW6 199 aa29.29■■■□□ 2.28
CTCF-203ENST00000566078 PADI4Q9UM07 663 aa29.29■■■□□ 2.28
CTCF-203ENST00000566078 PPT2Q9UMR5 302 aa29.29■■■□□ 2.28
CTCF-203ENST00000566078 OR2A25A4D2G3 310 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 PSMD12O00232 456 aaPredicted RBP29.28■■■□□ 2.28
CTCF-203ENST00000566078 PVRP15151 417 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 ALDH4A1P30038 563 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 IRX1P78414 480 aaPredicted RBP29.28■■■□□ 2.28
CTCF-203ENST00000566078 CYP4F3Q08477 520 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 FCRL6Q6DN72 434 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 LAIR1Q6GTX8 287 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 IRGCQ6NXR0 463 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 TTLQ8NG68 377 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 NSL1Q96IY1 281 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 APOLD1Q96LR9 279 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 SERPINI1Q99574 410 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 SARGQ9BW04 601 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 MRPL1Q9BYD6 325 aaKnown RBP29.28■■■□□ 2.28
CTCF-203ENST00000566078 BRINP2Q9C0B6 783 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 OR51B5Q9H339 312 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 TXLNGQ9NUQ3 528 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 TMED5Q9Y3A6 229 aa29.28■■■□□ 2.28
CTCF-203ENST00000566078 ASXL3Q9C0F0 2248 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 SIGLEC6O43699 453 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 T-ENOLP0DO92 83 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 EZRP15311 586 aaKnown RBP29.27■■■□□ 2.28
CTCF-203ENST00000566078 GPX3P22352 226 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 LACTB2Q53H82 288 aaPredicted RBP29.27■■■□□ 2.28
CTCF-203ENST00000566078 PAOXQ6QHF9 649 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 MINDY1Q8N5J2 469 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 EID2Q8N6I1 236 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 POU5F2Q8N7G0 328 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 SDR39U1Q9NRG7 319 aaPredicted RBP29.27■■■□□ 2.28
CTCF-203ENST00000566078 ASIC5Q9NY37 505 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 TAGLN3Q9UI15 199 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 G6PDP11413 515 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 CD1EP15812 388 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 OR1D5P58170 312 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 ACSM2AQ08AH3 577 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 NR0B2Q15466 257 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 PDCD4Q53EL6 469 aaKnown RBP29.27■■■□□ 2.28
CTCF-203ENST00000566078 AGKQ53H12 422 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 PLA2G2CQ5R387 149 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 CACHD1Q5VU97 1274 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 ACSM2BQ68CK6 577 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 LIX1Q8N485 282 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 MFSD9Q8NBP5 474 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 OR9I1Q8NGQ6 314 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 ZUFSPQ96AP4 578 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 TUBB6Q9BUF5 446 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 MS4A8Q9BY19 250 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 PCDHGA4Q9Y5G9 962 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 KLK4Q9Y5K2 254 aa29.27■■■□□ 2.28
CTCF-203ENST00000566078 SERPIND1P05546 499 aa29.26■■■□□ 2.27
CTCF-203ENST00000566078 ESRRAP11474 423 aaPredicted RBP29.26■■■□□ 2.27
CTCF-203ENST00000566078 CDH3P22223 829 aa29.26■■■□□ 2.27
CTCF-203ENST00000566078 PTX3P26022 381 aaPredicted RBP29.26■■■□□ 2.27
CTCF-203ENST00000566078 MAPK1P28482 360 aa29.26■■■□□ 2.27
CTCF-203ENST00000566078 AHRP35869 848 aa29.26■■■□□ 2.27
CTCF-203ENST00000566078 ATXN3P54252 364 aaPredicted RBP29.26■■■□□ 2.27
CTCF-203ENST00000566078 RPS15AP62244 130 aaKnown RBP29.26■■■□□ 2.27
CTCF-203ENST00000566078 TBL3Q12788 808 aaKnown RBP29.26■■■□□ 2.27
CTCF-203ENST00000566078 SPIN4Q56A73 249 aa29.26■■■□□ 2.27
CTCF-203ENST00000566078 NKAIN2Q5VXU1 208 aa29.26■■■□□ 2.27
CTCF-203ENST00000566078 CYP20A1Q6UW02 462 aa29.26■■■□□ 2.27
CTCF-203ENST00000566078 GK5Q6ZS86 529 aa29.26■■■□□ 2.27
CTCF-203ENST00000566078 BAHD1Q8TBE0 780 aaPredicted RBP29.26■■■□□ 2.27
CTCF-203ENST00000566078 CMTM5Q96DZ9 223 aa29.26■■■□□ 2.27
CTCF-203ENST00000566078 AHCYL2Q96HN2 611 aaKnown RBP29.26■■■□□ 2.27
CTCF-203ENST00000566078 SEMA6CQ9H3T2 930 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms