RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 PRKRAO75569 313 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 ALPPP05187 535 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 GSTT2BP0CG30 244 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 HSD3B1P14060 373 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 HSD3B2P26439 372 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 GPR143P51810 404 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SNRPNP63162 240 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 LBRQ14739 615 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 MPPE1Q53F39 396 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 GLT6D1Q7Z4J2 308 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 PHACTR4Q8IZ21 702 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SORT1Q99523 831 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SEPHS2Q99611 448 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 NUDT16L1Q9BRJ7 211 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 TPK1Q9H3S4 243 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 CUEDC1Q9NWM3 386 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 NKIRAS2Q9NYR9 191 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 MSRAQ9UJ68 235 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 CDH9Q9ULB4 789 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 EPOPA6NHQ4 379 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SLC38A8A6NNN8 435 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 EFCAB7A8K855 629 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 H0Y8X5 98 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 B4GAT1O43505 415 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 OR6B1O95007 311 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 AQP1P29972 269 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 IL2P60568 153 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 ACTBP60709 375 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 ACTG1P63261 375 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SGCGQ13326 291 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SPIDRQ14159 915 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 MARC1Q5VT66 337 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SEL1L3Q68CR1 1132 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 TMEM150AQ86TG1 271 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 FAM126BQ8IXS8 530 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 C10orf111Q8N326 155 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 CADM2Q8N3J6 435 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 TMEM156Q8N614 296 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 FAM47BQ8NA70 645 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 TXNDC5Q8NBS9 432 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 SUN3Q8TAQ9 357 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 CHFRQ96EP1 664 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 ECSITQ9BQ95 431 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 ZYG11BQ9C0D3 744 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 POLMQ9NP87 494 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 CTPS2Q9NRF8 586 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 PAQR5Q9NXK6 330 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 ZNF624Q9P2J8 865 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 CLCA2Q9UQC9 943 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 PLEKHM1Q9Y4G2 1056 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 KIAA0100Q14667 2235 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 PPM1DO15297 605 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 KERAO60938 352 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 FGF18O76093 207 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 OLFM2O95897 454 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 IFNA16P05015 189 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 C8GP07360 202 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 ATP6V1B1P15313 513 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CD53P19397 219 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 NTSP30990 170 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 VHLP40337 213 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 RBM34P42696 430 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 CCNG1P51959 295 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 VSX2P58304 361 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 ARF5P84085 180 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 TUSC3Q13454 348 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 RBBP7Q16576 425 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 GTF2IRD2BQ6EKJ0 949 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 PM20D1Q6GTS8 502 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 SLC39A5Q6ZMH5 540 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CYS1Q717R9 158 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 GTF2IRD2Q86UP8 949 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 SNX29P2Q8IUI4 249 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 TRIM48Q8IWZ4 208 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 TDRD5Q8NAT2 981 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 CXorf40AQ8TE69 158 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 STK32AQ8WU08 396 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 EGLN2Q96KS0 407 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 PPP3R2Q96LZ3 170 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CCNL2Q96S94 520 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 KCNIP2Q9NS61 270 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 BTN3A1O00481 513 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 ZBTB11O95625 1053 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 FGF3P11487 239 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 EEF1B2P24534 225 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 CLCN5P51795 746 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 ROR2Q01974 943 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 DENND5AQ6IQ26 1287 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 RANBP3LQ86VV4 465 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 FAM160A2Q8N612 972 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 CPEB3Q8NE35 698 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 ADCY4Q8NFM4 1077 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 SLC44A1Q8WWI5 657 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 RERGQ96A58 199 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 TBL1YQ9BQ87 522 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 NUSAP1Q9BXS6 441 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 PBX4Q9BYU1 374 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 C2orf42Q9NWW7 574 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 HCN2Q9UL51 889 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 SPATA2Q9UM82 520 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms