RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 A0A1W2PP18 115 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 TSC22D2O75157 780 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 FGF4P08620 206 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 FAM58BPP0C7Q3 252 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 CPN2P22792 545 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 RAB28P51157 221 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 YPEL5P62699 121 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 ACVR1Q04771 509 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 TMEM52BQ4KMG9 183 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 GLYATQ6IB77 296 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 TLDC1Q6P9B6 456 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 PAOXQ6QHF9 649 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 BPHLQ86WA6 291 aaPredicted RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 ZC3H7AQ8IWR0 971 aaKnown RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 CIDECQ96AQ7 238 aaPredicted RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 CITED4Q96RK1 184 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 MTERF1Q99551 399 aaKnown RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 TPK1Q9H3S4 243 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 EHD1Q9H4M9 534 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 ZBTB26Q9HCK0 441 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 FANCFQ9NPI8 374 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 ARHGEF3Q9NR81 526 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 IGSF5Q9NSI5 407 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 MBD2Q9UBB5 411 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 NUMBLQ9Y6R0 609 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 DOCK5Q9H7D0 1870 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 SCN1AP35498 2009 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 FBP2O00757 339 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 SOX30O94993 753 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 ANPEPP15144 967 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 ALDH6A1Q02252 535 aaKnown RBP7.31□□□□□ -1.24
TCF4-216ENST00000562680 MSANTD1Q6ZTZ1 278 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 SYNPOQ8N3V7 929 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 OR7G1Q8NGA0 311 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 CLHC1Q8NHS4 586 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 FUBP1Q96AE4 644 aaKnown RBP7.31□□□□□ -1.24
TCF4-216ENST00000562680 PHF7Q9BWX1 381 aaPredicted RBP7.31□□□□□ -1.24
TCF4-216ENST00000562680 MS4A12Q9NXJ0 267 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 FZD4Q9ULV1 537 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 CCL26Q9Y258 94 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 ENTPD2Q9Y5L3 495 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 TRBV23OR9-2A0A075B6M9 112 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 SSX5O60225 188 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 GSNP06396 782 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 RPL5P46777 297 aaKnown RBP7.31□□□□□ -1.24
TCF4-216ENST00000562680 KHKP50053 298 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 CSNK2BP67870 215 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 TXNL4AP83876 142 aaKnown RBP7.31□□□□□ -1.24
TCF4-216ENST00000562680 BNC1Q01954 994 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 ALG11Q2TAA5 492 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 GPAT3Q53EU6 434 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 TMEM35AQ53FP2 167 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 FBXO48Q5FWF7 155 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 ADCK1Q86TW2 530 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 ZFAND4Q86XD8 727 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 SVOPQ8N4V2 548 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 OR52B2Q96RD2 323 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 GPATCH1Q9BRR8 931 aaKnown RBP7.31□□□□□ -1.24
TCF4-216ENST00000562680 CHID1Q9BWS9 393 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 MEAF6Q9HAF1 191 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 LMAN1LQ9HAT1 526 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 PELI2Q9HAT8 420 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 KLF15Q9UIH9 416 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 TPRKBQ9Y3C4 175 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 TMEM150CB9EJG8 249 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 E2F3O00716 465 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 SDHDO14521 159 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 SLC28A2O43868 658 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 TNFAIP8O95379 198 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 CLUP10909 449 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 ATP6V1B1P15313 513 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 PRLHRP49683 370 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 HMBOX1Q6NT76 420 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 ZNF544Q6NX49 715 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 GALNT18Q6P9A2 607 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 CASP12Q6UXS9 341 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 TMC8Q8IU68 726 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 DEPDC4Q8N2C3 294 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 METTL21AQ8WXB1 218 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 VPS35Q96QK1 796 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 MNTQ99583 582 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 GPR174Q9BXC1 333 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 KRT84Q9NSB2 600 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 RSL24D1Q9UHA3 163 aaKnown RBP7.31□□□□□ -1.24
TCF4-216ENST00000562680 PRORSD1PA6NEY8 169 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 B4DGG1 531 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 M0QX08 132 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 UBXN7O94888 489 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 MPIP34949 423 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 MMP12P39900 470 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 MLLT1Q03111 559 aaPredicted RBP7.31□□□□□ -1.24
TCF4-216ENST00000562680 FGD3Q5JSP0 725 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 ALKBH2Q6NS38 261 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 BHLHA9Q7RTU4 235 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 HSD11B1LQ7Z5J1 315 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 HIPK1Q86Z02 1210 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 CLVS1Q8IUQ0 354 aaPredicted RBP7.31□□□□□ -1.24
TCF4-216ENST00000562680 ZNF786Q8N393 782 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 C2orf73Q8N5S3 287 aaPredicted RBP7.31□□□□□ -1.24
TCF4-216ENST00000562680 C1orf52Q8N6N3 182 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms