RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 STYXQ8WUJ0 223 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 ZNF354BQ96LW1 612 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 MDFIQ99750 246 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 SMR3AQ99954 134 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 UTP23Q9BRU9 249 aaKnown RBP9.35□□□□□ -0.91
TPM1-225ENST00000560679 GOLPH3Q9H4A6 298 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 PIH1D1Q9NWS0 290 aaKnown RBP9.35□□□□□ -0.91
TPM1-225ENST00000560679 FEZ2Q9UHY8 353 aaPredicted RBP9.35□□□□□ -0.91
TPM1-225ENST00000560679 ST6GALNAC2Q9UJ37 374 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 GNPTGQ9UJJ9 305 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 SLC39A10Q9ULF5 831 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 CDC14AQ9UNH5 594 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 NFS1Q9Y697 457 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 STAB1Q9NY15 2570 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 OR2W5A6NFC9 320 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 MROH6A6NGR9 719 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 GABRR3A8MPY1 467 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 H7C0C1 242 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 APOC4-APOC2K7ER74 178 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 SPOPO43791 374 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 NME2P1O60361 137 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 ZWINTO95229 277 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 C1orf105O95561 183 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 APOC2P02655 101 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 RPN2P04844 631 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 SP1P08047 785 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 FOSL1P15407 271 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 CD46P15529 392 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 NME2P22392 152 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 SLC1A1P43005 524 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 ATP5OP48047 213 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 ADAM8P78325 824 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 CBX1P83916 185 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 SEMA3AQ14563 771 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 TCEAL1Q15170 157 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 MEP1AQ16819 746 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 BEND6Q5SZJ8 279 aaPredicted RBP9.34□□□□□ -0.91
TPM1-225ENST00000560679 CPEB2Q7Z5Q1 589 aaKnown RBP9.34□□□□□ -0.91
TPM1-225ENST00000560679 ZNF227Q86WZ6 799 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 CCDC71Q8IV32 467 aaPredicted RBP9.34□□□□□ -0.91
TPM1-225ENST00000560679 RHOT2Q8IXI1 618 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 EID3Q8N140 333 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 OR13J1Q8NGT2 312 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 ASB5Q8WWX0 329 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 PBKQ96KB5 322 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 CALR3Q96L12 384 aaKnown RBP9.34□□□□□ -0.91
TPM1-225ENST00000560679 SPATA13Q96N96 652 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 OLFM1Q99784 485 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 FAM118BQ9BPY3 351 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 DPH7Q9BTV6 452 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 RAB11FIP5Q9BXF6 653 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 DRC3Q9H069 523 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 DNAJB12Q9NXW2 375 aaKnown RBP9.34□□□□□ -0.91
TPM1-225ENST00000560679 L3MBTL1Q9Y468 752 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 HEATR5BQ9P2D3 2071 aa9.34□□□□□ -0.91
TPM1-225ENST00000560679 FBN1P35555 2871 aaKnown RBP9.34□□□□□ -0.91
TPM1-225ENST00000560679 CSPG4Q6UVK1 2322 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 ANK3Q12955 4377 aaKnown RBP9.33□□□□□ -0.92
TPM1-225ENST00000560679 PHF3Q92576 2039 aaKnown RBP9.33□□□□□ -0.92
TPM1-225ENST00000560679 A0A1B0GTH9 108 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 KLK8O60259 260 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 CTAG2O75638 210 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 SLC25A12O75746 678 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 SASH3O75995 380 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 TPOP07202 933 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 ANXA5P08758 320 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 AOAHP28039 575 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 CXCR5P32302 372 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 PTGS2P35354 604 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 NR0B1P51843 470 aaKnown RBP9.33□□□□□ -0.92
TPM1-225ENST00000560679 HADHBP55084 474 aaKnown RBP9.33□□□□□ -0.92
TPM1-225ENST00000560679 MYBPHQ13203 477 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 PRPSAP1Q14558 356 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 CCDC38Q502W7 563 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 GLE1Q53GS7 698 aaKnown RBP9.33□□□□□ -0.92
TPM1-225ENST00000560679 GARNL3Q5VVW2 1013 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 CES4AQ5XG92 561 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 SLC25A25Q6KCM7 469 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 LRRC8BQ6P9F7 803 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 ZNF534Q76KX8 674 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 PRSS41Q7RTY9 318 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 PEX26Q7Z412 305 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 ANKRD37Q7Z713 158 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 PAQR7Q86WK9 346 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 PRIMA1Q86XR5 153 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 KATNAL2Q8IYT4 538 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 TAB3Q8N5C8 712 aaPredicted RBP9.33□□□□□ -0.92
TPM1-225ENST00000560679 ACTL9Q8TC94 416 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 ASZ1Q8WWH4 475 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 SEC16BQ96JE7 1060 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 ALPK1Q96QP1 1244 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 OR2A5Q96R48 311 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 CYTH2Q99418 400 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 PLCD4Q9BRC7 762 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 ACAT2Q9BWD1 397 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 HEMGNQ9BXL5 484 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 FUT8Q9BYC5 575 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 KCNK13Q9HB14 408 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 MMP25Q9NPA2 562 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 PLEKHA6Q9Y2H5 1048 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms