RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 MTHFD1P11586 935 aaKnown RBP5.98□□□□□ -1.45
HERC1-208ENST00000560462 GABRA1P14867 456 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 SDHAP31040 664 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 CYLC1P35663 651 aaPredicted RBP5.98□□□□□ -1.45
HERC1-208ENST00000560462 SRP14P37108 136 aaKnown RBP5.98□□□□□ -1.45
HERC1-208ENST00000560462 OR1D4P47884 311 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 GABRA4P48169 554 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 SULT1E1P49888 294 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 EMP2P54851 167 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 AP1S1P61966 158 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 XRCC4Q13426 336 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 NFIL3Q16649 462 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 VWA3BQ502W6 1294 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 ZNF648Q5T619 568 aaPredicted RBP5.98□□□□□ -1.45
HERC1-208ENST00000560462 WLSQ5T9L3 541 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 LCE2AQ5TA79 106 aaPredicted RBP5.98□□□□□ -1.45
HERC1-208ENST00000560462 HOOK3Q86VS8 718 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 BANPQ8N9N5 519 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 ZFP62Q8NB50 900 aaPredicted RBP5.98□□□□□ -1.45
HERC1-208ENST00000560462 C1GALT1C1Q96EU7 318 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 C16orf92Q96LL3 132 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 IMMP1LQ96LU5 166 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 QRFPRQ96P65 431 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 MCCC1Q96RQ3 725 aaPredicted RBP5.98□□□□□ -1.45
HERC1-208ENST00000560462 NPY6RQ99463 290 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 WDR83Q9BRX9 315 aaKnown RBP5.98□□□□□ -1.45
HERC1-208ENST00000560462 TUBB6Q9BUF5 446 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 SELENOOQ9BVL4 669 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 RBM4Q9BWF3 364 aaKnown RBP5.98□□□□□ -1.45
HERC1-208ENST00000560462 KIR3DX1Q9H7L2 352 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 ERVK13-1Q9NX77 482 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 ZNF226Q9NYT6 803 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 IL1RAPL1Q9NZN1 696 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 ZNF282Q9UDV7 671 aaPredicted RBP5.98□□□□□ -1.45
HERC1-208ENST00000560462 OR12D3Q9UGF7 316 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 KLF13Q9Y2Y9 288 aaPredicted RBP5.98□□□□□ -1.45
HERC1-208ENST00000560462 NFS1Q9Y697 457 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 CFAP20Q9Y6A4 193 aaKnown RBP5.98□□□□□ -1.45
HERC1-208ENST00000560462 TENM2Q9NT68 2774 aa5.98□□□□□ -1.45
HERC1-208ENST00000560462 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.97□□□□□ -1.45
HERC1-208ENST00000560462 FAM234BA2RU67 622 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 TRIM77I1YAP6 450 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 SOCS5O75159 536 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 CTPS1P17812 591 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 PTX3P26022 381 aaPredicted RBP5.97□□□□□ -1.45
HERC1-208ENST00000560462 CLCN7P51798 805 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 CORO7P57737 925 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 ZNF267Q14586 743 aaPredicted RBP5.97□□□□□ -1.45
HERC1-208ENST00000560462 BTBD16Q32M84 506 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 MROH9Q5TGP6 573 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 MANEALQ5VSG8 457 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 DENND1BQ6P3S1 775 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 ARHGEF18Q6ZSZ5 1173 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 SEM1Q6ZVN7 128 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 INTS8Q75QN2 995 aaKnown RBP5.97□□□□□ -1.45
HERC1-208ENST00000560462 ZNF547Q8IVP9 402 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 METTL27Q8N6F8 245 aaPredicted RBP5.97□□□□□ -1.45
HERC1-208ENST00000560462 TNIP2Q8NFZ5 429 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 UHMK1Q8TAS1 419 aaKnown RBP5.97□□□□□ -1.45
HERC1-208ENST00000560462 TMEM174Q8WUU8 243 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.97□□□□□ -1.45
HERC1-208ENST00000560462 NPAS2Q99743 824 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 CNPPD1Q9BV87 410 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 RBM24Q9BX46 236 aaKnown RBP5.97□□□□□ -1.45
HERC1-208ENST00000560462 GTPBP4Q9BZE4 634 aaKnown RBP5.97□□□□□ -1.45
HERC1-208ENST00000560462 SRMSQ9H3Y6 488 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 ASB8Q9H765 288 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 KCNK13Q9HB14 408 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 PDFQ9HBH1 243 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 CUTCQ9NTM9 273 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 TMEM51Q9NW97 253 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 GALNT8Q9NY28 637 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.97□□□□□ -1.45
HERC1-208ENST00000560462 DUSP13Q9UII6 198 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 STAP1Q9ULZ2 295 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 LAMP3Q9UQV4 416 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 COA3Q9Y2R0 106 aaPredicted RBP5.97□□□□□ -1.45
HERC1-208ENST00000560462 PTGDR2Q9Y5Y4 395 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 MAU2Q9Y6X3 613 aa5.97□□□□□ -1.45
HERC1-208ENST00000560462 LOC102723996A0A087X1L8 192 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 WASH4PA8MWX3 477 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 C2orf74A8MZ97 194 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 J3KR12 359 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 BTN3A1O00481 513 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 SCDO00767 359 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 PEX1O43933 1283 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 TUSC2O75896 110 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 SLC25A14O95258 325 aaPredicted RBP5.96□□□□□ -1.46
HERC1-208ENST00000560462 IGHV4-39P01824 125 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 NR3C1P04150 777 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 KRT13P13646 458 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 CEACAM8P31997 349 aaPredicted RBP5.96□□□□□ -1.46
HERC1-208ENST00000560462 GTF2H1P32780 548 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 MC3RP41968 323 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 STAT6P42226 847 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 CYB561P49447 251 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 GZMKP49863 264 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 MXI1P50539 228 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 STC1P52823 247 aa5.96□□□□□ -1.46
HERC1-208ENST00000560462 YBEYP58557 167 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms