RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 PDLIM3Q53GG5 364 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 KLHL22Q53GT1 634 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 XKR6Q5GH73 641 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 LDLRAP1Q5SW96 308 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 ATF7IP2Q5U623 682 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 FAM160B1Q5W0V3 765 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 PAPD7Q5XG87 772 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 ANKS6Q68DC2 871 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF470Q6ECI4 717 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 TTI2Q6NXR4 508 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZC3H14Q6PJT7 736 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 WASH2PQ6VEQ5 465 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZPBP2Q6X784 338 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 Q6ZPB1 254 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 RNF207Q6ZRF8 634 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 TRILQ7L0X0 811 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CUZD1Q86UP6 607 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 VRK2Q86Y07 508 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 MMAAQ8IVH4 418 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 LRRC8AQ8IWT6 810 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 ARHGAP12Q8IWW6 846 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 KBTBD2Q8IY47 623 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC38A6Q8IZM9 456 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 DCBLD1Q8N8Z6 715 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 MFSD9Q8NBP5 474 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 FAM71CQ8NEG0 241 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 NUP43Q8NFH3 380 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 TBC1D16Q8TBP0 767 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 U2AF1L4Q8WU68 220 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 KCTD4Q8WVF5 259 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZCCHC14Q8WYQ9 949 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 ROBO4Q8WZ75 1007 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 SNX19Q92543 992 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 BORCS5Q969J3 196 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 SNRNP40Q96DI7 357 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 PDXPQ96GD0 296 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CLPTM1LQ96KA5 538 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 GLT1D1Q96MS3 346 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 BTBD9Q96Q07 612 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 TEFMQ96QE5 360 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 MCCC1Q96RQ3 725 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 OMDQ99983 421 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 MSTO1Q9BUK6 570 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 FNDC11Q9BVV2 318 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 KIFC1Q9BW19 673 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 RAB1BQ9H0U4 201 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 PCDHAC1Q9H158 963 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC6A15Q9H2J7 730 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC32A1Q9H598 525 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 EBF2Q9HAK2 575 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 HEYLQ9NQ87 328 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 DUSP22Q9NRW4 184 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CCDC59Q9P031 241 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 GCNT4Q9P109 453 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CRLS1Q9UJA2 301 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZFP69BQ9UJL9 534 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 KCND3Q9UK17 655 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CA5BQ9Y2D0 317 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 VWA7Q9Y334 891 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 NUBP2Q9Y5Y2 271 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 LRPPRCP42704 1394 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 PLEKHG1Q9ULL1 1385 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 SOGA1O94964 1423 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CEP162Q5TB80 1403 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 FAM237BA0A1B0GVD1 139 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 A0A1W2PQ45 241 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 A0A1W2PQY0 241 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 MBLAC1A4D2B0 266 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 CLEC18AA5D8T8 446 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 TMEM191CA6NGB0 347 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 A6NIZ1 184 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 MAGEB17A8MXT2 336 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 H3BMM5 538 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 NRP1O14786 923 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 CHADO15335 359 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 MID1O15344 667 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 CLOCKO15516 846 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 HSPA12AO43301 675 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF208O43345 1280 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 MAGEC1O60732 1142 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 SNNO75324 88 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 AVILO75366 819 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 CSDE1O75534 798 aaKnown RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 CCNKO75909 580 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 KDM4BO94953 1096 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 BAG3O95817 575 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC16A8O95907 504 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 GH1P01241 217 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 C4BPAP04003 597 aaKnown RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 HBQ1P09105 142 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 C1SP09871 688 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 ALPIP09923 528 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 FTH1P19P0C7X4 201 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 LINC00614P0C842 121 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 G6PDP11413 515 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 ENO3P13929 434 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 FUT1P19526 365 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 S100PP25815 95 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 KLRK1P26718 216 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms