RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 GUCA1CO95843 209 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 ALPPP05187 535 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 C8GP07360 202 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 SAT1P21673 171 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 NAA25Q14CX7 972 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 C18orf21Q32NC0 220 aaPredicted RBP16.8■□□□□ 0.28
HDDC3-205ENST00000559898 CATSPEREQ5SY80 951 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 FHL5Q5TD97 284 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 AGAP7PQ5VUJ5 663 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 GARNL3Q5VVW2 1013 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 UGT3A1Q6NUS8 523 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 CAPN12Q6ZSI9 719 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 SLC26A11Q86WA9 606 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 FBXO36Q8NEA4 188 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 BRIX1Q8TDN6 353 aaKnown RBP16.8■□□□□ 0.28
HDDC3-205ENST00000559898 NACC2Q96BF6 587 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 AGAP4Q96P64 663 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 WDR77Q9BQA1 342 aaPredicted RBP16.8■□□□□ 0.28
HDDC3-205ENST00000559898 RBCK1Q9BYM8 510 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 UNKQ9C0B0 810 aaKnown RBP16.8■□□□□ 0.28
HDDC3-205ENST00000559898 UTP6Q9NYH9 597 aaKnown RBP16.8■□□□□ 0.28
HDDC3-205ENST00000559898 PTGFRNQ9P2B2 879 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 VWA7Q9Y334 891 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 SAR1BQ9Y6B6 198 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 ZNF860A6NHJ4 632 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 AGFG2O95081 481 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 BMP10O95393 424 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 HEXBP07686 556 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 PRR35P0CG20 571 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 ITGAMP11215 1152 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 GMPRP36959 345 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 RGS4P49798 205 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 RELAQ04206 551 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 PDIA2Q13087 525 aaKnown RBP16.79■□□□□ 0.28
HDDC3-205ENST00000559898 PDAP1Q13442 181 aaKnown RBP16.79■□□□□ 0.28
HDDC3-205ENST00000559898 TMEM214Q6NUQ4 689 aaKnown RBP16.79■□□□□ 0.28
HDDC3-205ENST00000559898 LCTLQ6UWM7 567 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 SBSNQ6UWP8 590 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 KIAA0408Q6ZU52 694 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 PDIK1LQ8N165 341 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 OR5T3Q8NGG3 340 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 OR56A3Q8NH54 315 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 DNAJB14Q8TBM8 379 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 ANKRD49Q8WVL7 239 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 MVB12AQ96EY5 273 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 BARD1Q99728 777 aaKnown RBP16.79■□□□□ 0.28
HDDC3-205ENST00000559898 TGIF2Q9GZN2 237 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 VN1R1Q9GZP7 353 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 MKKSQ9NPJ1 570 aaPredicted RBP16.79■□□□□ 0.28
HDDC3-205ENST00000559898 MKL2Q9ULH7 1088 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 CDC14AQ9UNH5 594 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 COPG1Q9Y678 874 aaKnown RBP16.79■□□□□ 0.28
HDDC3-205ENST00000559898 CNTRLQ7Z7A1 2325 aa16.79■□□□□ 0.28
HDDC3-205ENST00000559898 NSG1A0A0A6YYJ2 146 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 NPEPPSL1A6NEC2 478 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 SLC16A5O15375 505 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 RDH16O75452 317 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 IPO13O94829 963 aaKnown RBP16.78■□□□□ 0.28
HDDC3-205ENST00000559898 ANXA5P08758 320 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 SOX11P35716 441 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 IL2P60568 153 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 RPS15AP62244 130 aaKnown RBP16.78■□□□□ 0.28
HDDC3-205ENST00000559898 SP140Q13342 867 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 FAM53BQ14153 422 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 PPP1R3AQ16821 1122 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 TMEM205Q6UW68 189 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 NDUFAF7Q7L592 441 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 GALNT7Q86SF2 657 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 C17orf64Q86WR6 236 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 CEP97Q8IW35 865 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 PPP4R1Q8TF05 950 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 SNF8Q96H20 258 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 TSNARE1Q96NA8 513 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 NAT9Q9BTE0 207 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 DPH5Q9H2P9 285 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 ARL15Q9NXU5 204 aa16.78■□□□□ 0.28
HDDC3-205ENST00000559898 ERRFI1Q9UJM3 462 aaPredicted RBP16.78■□□□□ 0.28
HDDC3-205ENST00000559898 KCNE1BA0A087WTH5 132 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 LOC102723996A0A087X1L8 192 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 A1L4Q6 167 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 EFCAB8A8MWE9 144 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 CXorf49A8MYA2 514 aaPredicted RBP16.77■□□□□ 0.28
HDDC3-205ENST00000559898 E7ESA3 106 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 E2F3O00716 465 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 GP1BBP13224 206 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 ARL4CP56559 192 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 TAS2R39P59534 338 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 OLR1P78380 273 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 MFAP5Q13361 173 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 TRADDQ15628 312 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 FAM45BPQ6NSW5 357 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 SYDE1Q6ZW31 735 aaPredicted RBP16.77■□□□□ 0.28
HDDC3-205ENST00000559898 STRA8Q7Z7C7 330 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 ZC3HC1Q86WB0 502 aaKnown RBP16.77■□□□□ 0.28
HDDC3-205ENST00000559898 MFSD9Q8NBP5 474 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 OR51Q1Q8NH59 317 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 FAM45AQ8TCE6 357 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 MCMBPQ9BTE3 642 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 AICDAQ9GZX7 198 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 C14orf105Q9NVL8 296 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms