RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 KCNN3Q9UGI6 736 aa17.27■□□□□ 0.36
ABCD4-228ENST00000557588 PCDHA13Q9Y5I0 950 aa17.27■□□□□ 0.36
ABCD4-228ENST00000557588 PRRC2AP48634 2157 aaKnown RBP17.26■□□□□ 0.35
ABCD4-228ENST00000557588 FBN3Q75N90 2809 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 GOLGA6L9A6NEM1 432 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 HAT1O14929 419 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 CD3EAPO15446 510 aaKnown RBP17.26■□□□□ 0.35
ABCD4-228ENST00000557588 SLC25A12O75746 678 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 MSX1P28360 303 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 PTGER1P34995 402 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 GRIA1P42261 906 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 XCR1P46094 333 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 KLF1Q13351 362 aaPredicted RBP17.26■□□□□ 0.35
ABCD4-228ENST00000557588 CTSL3PQ5NE16 218 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 PAPD4Q6PIY7 484 aaKnown RBP17.26■□□□□ 0.35
ABCD4-228ENST00000557588 PRSS41Q7RTY9 318 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 TMEM200AQ86VY9 491 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 DMRTC2Q8IXT2 367 aaPredicted RBP17.26■□□□□ 0.35
ABCD4-228ENST00000557588 SHISA5Q8N114 240 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 CPSF7Q8N684 471 aaKnown RBP17.26■□□□□ 0.35
ABCD4-228ENST00000557588 OR51Q1Q8NH59 317 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 FAM57AQ8TBR7 257 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 ASB5Q8WWX0 329 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 FOXC2Q99958 501 aa17.26■□□□□ 0.35
ABCD4-228ENST00000557588 MAP1AP78559 2803 aaPredicted RBP17.25■□□□□ 0.35
ABCD4-228ENST00000557588 PSIP1O75475 530 aaKnown RBP17.25■□□□□ 0.35
ABCD4-228ENST00000557588 FAM155BO75949 473 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 CHRNB4P30926 498 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 HSD17B2P37059 387 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 IST1P53990 364 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 TAS2R50P59544 299 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 ABATP80404 500 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 CD163Q86VB7 1156 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 TGIF2LYQ8IUE0 185 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 POGLUT1Q8NBL1 392 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
ABCD4-228ENST00000557588 PPHLN1Q8NEY8 458 aaKnown RBP17.25■□□□□ 0.35
ABCD4-228ENST00000557588 LILRB4Q8NHJ6 448 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 CALR3Q96L12 384 aaKnown RBP17.25■□□□□ 0.35
ABCD4-228ENST00000557588 ZNF559Q9BR84 538 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 TRIM45Q9H8W5 580 aaPredicted RBP17.25■□□□□ 0.35
ABCD4-228ENST00000557588 FAM114A2Q9NRY5 505 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 HCN3Q9P1Z3 774 aa17.25■□□□□ 0.35
ABCD4-228ENST00000557588 TSR3Q9UJK0 312 aaKnown RBP17.25■□□□□ 0.35
ABCD4-228ENST00000557588 OR2W5A6NFC9 320 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 FAM90A27PA6NNH2 459 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 ZNF839A8K0R7 811 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 AKR1B15C9JRZ8 316 aaPredicted RBP17.24■□□□□ 0.35
ABCD4-228ENST00000557588 NDUFS3O75489 264 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 TOXO94900 526 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 PTGS2P35354 604 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 PNLIPRP1P54315 467 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 EIF3BP55884 814 aaKnown RBP17.24■□□□□ 0.35
ABCD4-228ENST00000557588 TSTA3Q13630 321 aaPredicted RBP17.24■□□□□ 0.35
ABCD4-228ENST00000557588 USP10Q14694 798 aaKnown RBP17.24■□□□□ 0.35
ABCD4-228ENST00000557588 MAPKAPK3Q16644 382 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 SFT2D3Q587I9 215 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 ZNF468Q5VIY5 522 aaPredicted RBP17.24■□□□□ 0.35
ABCD4-228ENST00000557588 VN1R4Q7Z5H5 301 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 ADCK2Q7Z695 626 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 ZNF227Q86WZ6 799 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 PLD3Q8IV08 490 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 CHDHQ8NE62 594 aaPredicted RBP17.24■□□□□ 0.35
ABCD4-228ENST00000557588 MCOLN3Q8TDD5 553 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 NINJ1Q92982 152 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 BIRC8Q96P09 236 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 LPAR4Q99677 370 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 EBNA1BP2Q99848 306 aaKnown RBP17.24■□□□□ 0.35
ABCD4-228ENST00000557588 ETNK1Q9HBU6 452 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 TREX1Q9NSU2 369 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 RNF6Q9Y252 685 aa17.24■□□□□ 0.35
ABCD4-228ENST00000557588 NKX2-6A6NCS4 301 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 E7ENX8 843 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 KIF5CO60282 957 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 NIPSNAP2O75323 286 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 SLC16A8O95907 504 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 PTMAP06454 111 aaKnown RBP17.23■□□□□ 0.35
ABCD4-228ENST00000557588 HOXD4P09016 255 aaPredicted RBP17.23■□□□□ 0.35
ABCD4-228ENST00000557588 IL1RNP18510 177 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 FDFT1P37268 417 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 ANP32AP39687 249 aaKnown RBP17.23■□□□□ 0.35
ABCD4-228ENST00000557588 BCL6P41182 706 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 RHAGQ02094 409 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 TAP2Q03519 686 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 ABRAXAS2Q15018 415 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 TMEM211Q6ICI0 200 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 TMEM214Q6NUQ4 689 aaKnown RBP17.23■□□□□ 0.35
ABCD4-228ENST00000557588 CEP128Q6ZU80 1094 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 ZNF480Q8WV37 535 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 NRGNQ92686 78 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 PKP4Q99569 1192 aa17.23■□□□□ 0.35
ABCD4-228ENST00000557588 FLNAP21333 2647 aaKnown RBP17.23■□□□□ 0.35
ABCD4-228ENST00000557588 KCNE1BA0A087WTH5 132 aa17.22■□□□□ 0.35
ABCD4-228ENST00000557588 SMAPO00193 183 aa17.22■□□□□ 0.35
ABCD4-228ENST00000557588 TFECO14948 347 aaPredicted RBP17.22■□□□□ 0.35
ABCD4-228ENST00000557588 STATHP02808 62 aa17.22■□□□□ 0.35
ABCD4-228ENST00000557588 CATP04040 527 aaKnown RBP17.22■□□□□ 0.35
ABCD4-228ENST00000557588 TPOP07202 933 aa17.22■□□□□ 0.35
ABCD4-228ENST00000557588 TPP2P29144 1249 aaPredicted RBP17.22■□□□□ 0.35
ABCD4-228ENST00000557588 SLC26A5P58743 744 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms