RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 CCR8P51685 355 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 AIF1P55008 147 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 CDH6P55285 790 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 FAPQ12884 760 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 PCSK7Q16549 785 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 BCL7AQ4VC05 210 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 NSUN5P2Q63ZY6 315 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 CLEC2AQ6UVW9 174 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 LYPD8Q6UX82 237 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 Q6ZPA2 131 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 GK5Q6ZS86 529 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 PEG10Q86TG7 708 aaKnown RBP11.15□□□□□ -0.62
ABCD4-226ENST00000556971 C2orf73Q8N5S3 287 aaPredicted RBP11.15□□□□□ -0.62
ABCD4-226ENST00000556971 TEX26Q8N6G2 289 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 AKAP1Q92667 903 aaKnown RBP eCLIP11.15□□□□□ -0.62
ABCD4-226ENST00000556971 MVB12AQ96EY5 273 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 SCYL1Q96KG9 808 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 TRIB1Q96RU8 372 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 RBM4Q9BWF3 364 aaKnown RBP11.15□□□□□ -0.62
ABCD4-226ENST00000556971 SLC6A15Q9H2J7 730 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 IL1RL2Q9HB29 575 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 BARX1Q9HBU1 254 aaPredicted RBP11.15□□□□□ -0.62
ABCD4-226ENST00000556971 IL26Q9NPH9 171 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 INTS7Q9NVH2 962 aaKnown RBP11.15□□□□□ -0.62
ABCD4-226ENST00000556971 ARL15Q9NXU5 204 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 ERVK-11Q9UQG0 969 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 MAGED1Q9Y5V3 778 aaPredicted RBP11.15□□□□□ -0.62
ABCD4-226ENST00000556971 SCINQ9Y6U3 715 aa11.15□□□□□ -0.62
ABCD4-226ENST00000556971 AHRRA9YTQ3 701 aa11.14□□□□□ -0.63
ABCD4-226ENST00000556971 SGTAO43765 313 aa11.14□□□□□ -0.63
ABCD4-226ENST00000556971 NUDT6P53370 316 aa11.14□□□□□ -0.63
ABCD4-226ENST00000556971 NOMO3P69849 1222 aa11.14□□□□□ -0.63
ABCD4-226ENST00000556971 OCLNQ16625 522 aa11.14□□□□□ -0.63
ABCD4-226ENST00000556971 PRTGQ2VWP7 1150 aa11.14□□□□□ -0.63
ABCD4-226ENST00000556971 PPP6R3Q5H9R7 873 aaPredicted RBP11.14□□□□□ -0.63
ABCD4-226ENST00000556971 C9orf106Q8NAJ2 232 aa11.14□□□□□ -0.63
ABCD4-226ENST00000556971 ANKRD9Q96BM1 317 aaPredicted RBP11.14□□□□□ -0.63
ABCD4-226ENST00000556971 LINC00615Q96LM1 132 aaPredicted RBP11.14□□□□□ -0.63
ABCD4-226ENST00000556971 ADGRE3Q9BY15 652 aa11.14□□□□□ -0.63
ABCD4-226ENST00000556971 XPO4Q9C0E2 1151 aaKnown RBP11.14□□□□□ -0.63
ABCD4-226ENST00000556971 PCDHA7Q9UN72 937 aa11.14□□□□□ -0.63
ABCD4-226ENST00000556971 PRR14LQ5THK1 2151 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 FEZF1A0PJY2 475 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 MBD3L3A6NE82 208 aaPredicted RBP11.13□□□□□ -0.63
ABCD4-226ENST00000556971 ELOA3DA6NLF2 546 aaPredicted RBP11.13□□□□□ -0.63
ABCD4-226ENST00000556971 TRIM77I1YAP6 450 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 PRPSAP2O60256 369 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 CD86P42081 329 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 LSM11P83369 360 aaKnown RBP eCLIP11.13□□□□□ -0.637e-9■■■■□ 21.2
ABCD4-226ENST00000556971 ELOA3BQ3SY89 546 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 WDR59Q6PJI9 974 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 ELOA3Q8NG57 546 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 MBD3L2Q8NHZ7 208 aaPredicted RBP11.13□□□□□ -0.63
ABCD4-226ENST00000556971 CRACR2AQ9BSW2 395 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 ETNK2Q9NVF9 386 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.13□□□□□ -0.63
ABCD4-226ENST00000556971 METRNQ9UJH8 293 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 RUVBL1Q9Y265 456 aaKnown RBP11.13□□□□□ -0.63
ABCD4-226ENST00000556971 ASF1AQ9Y294 204 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 PCDHA13Q9Y5I0 950 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 PTGDR2Q9Y5Y4 395 aa11.13□□□□□ -0.63
ABCD4-226ENST00000556971 KPNA5O15131 536 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 FOXS1O43638 330 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 LSM8O95777 96 aaKnown RBP11.12□□□□□ -0.63
ABCD4-226ENST00000556971 CYC1P08574 325 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 KRT3P12035 628 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 SLC25A16P16260 332 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 CD151P48509 253 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 TRPC1P48995 793 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 DPYSQ14117 519 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 ABRAXAS2Q15018 415 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 TRIM65Q6PJ69 517 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 SH2D5Q6ZV89 423 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 POLNQ7Z5Q5 900 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 LINC01555Q8NAE3 123 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 TSLPQ969D9 159 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 FAM111AQ96PZ2 611 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 SFXN3Q9BWM7 321 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 BHLHE41Q9C0J9 482 aaPredicted RBP11.12□□□□□ -0.63
ABCD4-226ENST00000556971 MAGEE1Q9HCI5 957 aa11.12□□□□□ -0.63
ABCD4-226ENST00000556971 C15orf38-AP3S2A0A0A6YYH1 394 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 A8MXE2 369 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 HLA-DQB2P05538 268 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 USF1P22415 310 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-226ENST00000556971 PKLRP30613 574 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 DNASE1L1P49184 302 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 STX17P56962 302 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 OR4D2P58180 307 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 LGALS3BPQ08380 585 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 DOC2BQ14184 412 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 HKDC1Q2TB90 917 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 BEX5Q5H9J7 111 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 RESP18Q5W5W9 173 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 C22orf34Q6ZV56 151 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 TMX3Q96JJ7 454 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 FAM173AQ9BQD7 235 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 SNRNP25Q9BV90 132 aaKnown RBP11.11□□□□□ -0.63
ABCD4-226ENST00000556971 DRC3Q9H069 523 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 LUC7LQ9NQ29 371 aaKnown RBP11.11□□□□□ -0.63
ABCD4-226ENST00000556971 DNAJC12Q9UKB3 198 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms