RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 RASA2Q15283 850 aa23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 CRTC2Q53ET0 693 aaPredicted RBP23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 GARNL3Q5VVW2 1013 aa23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 SLCO4C1Q6ZQN7 724 aa23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 LRRC70Q7Z2Q7 622 aa23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 TBC1D19Q8N5T2 526 aa23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 ACMSDQ8TDX5 336 aa23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 MZB1Q8WU39 189 aa23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 SCYL1Q96KG9 808 aa23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 C10orf90Q96M02 699 aa23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 AIF1LQ9BQI0 150 aa23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 SPNS1Q9H2V7 528 aa23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 ACTL8Q9H568 366 aa23.43■■□□□ 1.34
SDR39U1-221ENST00000556707 OR1F1O43749 312 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 KLK8O60259 260 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 CCNT2O60583 730 aaKnown RBP23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 ONECUT2O95948 504 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 TUBBP07437 444 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 NUDT17P0C025 328 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 GFAPP14136 432 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 ITGAXP20702 1163 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 SLCO1A2P46721 670 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 NCF4Q15080 339 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 PDK4Q16654 411 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 ARHGEF39Q8N4T4 335 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 ENDOVQ8N8Q3 282 aaKnown RBP23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 SNX31Q8N9S9 440 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 CAMKVQ8NCB2 501 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 ZNF740Q8NDX6 193 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 TM4SF19Q96DZ7 209 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 IFT80Q9P2H3 777 aaPredicted RBP23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 CPSF2Q9P2I0 782 aaKnown RBP23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 ASB1Q9Y576 335 aa23.42■■□□□ 1.34
SDR39U1-221ENST00000556707 NKX2-8O15522 239 aa23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 CREG1O75629 220 aa23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 C1GALT1C1LP0DN25 315 aa23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 ALDH18A1P54886 795 aaKnown RBP23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 NAA30Q147X3 362 aaPredicted RBP23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 SETDB1Q15047 1291 aa23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 PFKFB4Q16877 469 aa23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 ATG9BQ674R7 924 aa23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 ASPGQ86U10 573 aa23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 LCA5Q86VQ0 697 aa23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 EPS8L3Q8TE67 593 aaKnown RBP23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 MRPL57Q9BQC6 102 aaKnown RBP23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 SLC22A11Q9NSA0 550 aa23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 XPR1Q9UBH6 696 aa23.41■■□□□ 1.34
SDR39U1-221ENST00000556707 SMIM23A6NLE4 172 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 CLGNO14967 610 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 CDH16O75309 829 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 H2AFYO75367 372 aaKnown RBP23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 RECKO95980 971 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 STATHP02808 62 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 PIM1P11309 404 aaPredicted RBP23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 VARSP26640 1264 aaKnown RBP23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 AHRP35869 848 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 SCTRP47872 440 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 RPS18P62269 152 aaKnown RBP23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 CYP4F2P78329 520 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 NFKB2Q00653 900 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 MLIPQ5VWP3 458 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 PRMT9Q6P2P2 845 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 SYVN1Q86TM6 617 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 MREGQ8N565 214 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 DTWD1Q8N5C7 304 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 SLC13A3Q8WWT9 602 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 MVB12AQ96EY5 273 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 MRPL46Q9H2W6 279 aaKnown RBP23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 EHD1Q9H4M9 534 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 GEMIN8Q9NWZ8 242 aaKnown RBP23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 OPTCQ9UBM4 332 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 GPN3Q9UHW5 284 aaPredicted RBP23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 TMCO1Q9UM00 188 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 PIEZO2Q9H5I5 2752 aa23.4■■□□□ 1.34
SDR39U1-221ENST00000556707 K7EPI3 171 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 CD63P08962 238 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 ATXN8OSP0DMR3 200 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 PRKAR1AP10644 381 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 EPORP19235 508 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 CXCR2P25025 360 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 OR1D4P47884 311 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 CDC20Q12834 499 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 FAM53BQ14153 422 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 SLC9A5Q14940 896 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 NDUFA9Q16795 377 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 METTL27Q8N6F8 245 aaPredicted RBP23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 OR2W6PQ8NHA6 318 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 FKBP10Q96AY3 582 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 MACROD1Q9BQ69 325 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 ZFP69BQ9UJL9 534 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 TCFL5Q9UL49 500 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 CDC14AQ9UNH5 594 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 PADI2Q9Y2J8 665 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 MED13Q9UHV7 2174 aa23.39■■□□□ 1.33
SDR39U1-221ENST00000556707 ATMQ13315 3056 aa23.38■■□□□ 1.33
SDR39U1-221ENST00000556707 A0A1W2PPM1 405 aa23.38■■□□□ 1.33
SDR39U1-221ENST00000556707 GOLGA8RI6L899 631 aa23.38■■□□□ 1.33
SDR39U1-221ENST00000556707 TK2O00142 265 aa23.38■■□□□ 1.33
SDR39U1-221ENST00000556707 PRAMEF4O60810 478 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms