RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 MLYCDO95822 493 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 STATHP02808 62 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 HRH2P25021 359 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 MST1P26927 711 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 RPS15AP62244 130 aaKnown RBP16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 DHX34Q14147 1143 aaKnown RBP16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 TRIP13Q15645 432 aaPredicted RBP16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 ZNF766Q5HY98 468 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 BNC2Q6ZN30 1099 aaPredicted RBP16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 LANCL3Q6ZV70 420 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 GDF7Q7Z4P5 450 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 GIMAP7Q8NHV1 300 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 KCNJ9Q92806 393 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 TRIM44Q96DX7 344 aaPredicted RBP16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 MAGED4Q96JG8 741 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 ZNF354BQ96LW1 612 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 PRAP1Q96NZ9 151 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 SLC30A3Q99726 388 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 CHST11Q9NPF2 352 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 CCDC177Q9NQR7 707 aaPredicted RBP16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 FBXO6Q9NRD1 293 aaPredicted RBP16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 HCN3Q9P1Z3 774 aa16.68■□□□□ 0.26
SDR39U1-219ENST00000556523 SCN2AQ99250 2005 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 IGHV3-20A0A0C4DH32 117 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 CEP104O60308 925 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 COX6B1P14854 86 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 IL1RNP18510 177 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 GRNP28799 593 aaKnown RBP16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 PTGER4P35408 488 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 XCR1P46094 333 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 AGTR2P50052 363 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 PMP22Q01453 160 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 GPS1Q13098 491 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 PTK6Q13882 451 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 PLAG1Q6DJT9 500 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 UBE2R2Q712K3 238 aaPredicted RBP16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 SLC35F6Q8N357 371 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 ASB11Q8WXH4 323 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 KCNK13Q9HB14 408 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 ANKHQ9HCJ1 492 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 TMEM184CQ9NVA4 438 aa16.67■□□□□ 0.26
SDR39U1-219ENST00000556523 FAM237BA0A1B0GVD1 139 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 TTI1O43156 1089 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 SLC19A2O60779 497 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 AVILO75366 819 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 HTR1EP28566 365 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 IMPA1P29218 277 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 SKIV2L2P42285 1042 aaKnown RBP16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 EFNA3P52797 238 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 GNG11P61952 73 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 TBPL1P62380 186 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 SRSF11Q05519 484 aaKnown RBP16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 EXT1Q16394 746 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 FCRLBQ6BAA4 426 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 DENND6AQ8IWF6 608 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 BEST3Q8N1M1 668 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 CAMKVQ8NCB2 501 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 OR51Q1Q8NH59 317 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 ZCCHC10Q8TBK6 192 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 CALML6Q8TD86 181 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 THAP11Q96EK4 314 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 CYTH2Q99418 400 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 GPR21Q99679 349 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 PCBD2Q9H0N5 130 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 DHRS7Q9Y394 339 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 COMMD10Q9Y6G5 202 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 PKDREJQ9NTG1 2253 aa16.66■□□□□ 0.26
SDR39U1-219ENST00000556523 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 FAM227AF5H4B4 570 aa16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 GFYI3L273 518 aa16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 F7P08709 466 aaPredicted RBP16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 ESRRAP11474 423 aaPredicted RBP16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 SLC1A2P43004 574 aa16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 MAGEA6P43360 314 aa16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 CTBP1Q13363 440 aa16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 MEP1AQ16819 746 aa16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 ZXDCQ2QGD7 858 aaPredicted RBP16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 ACER2Q5QJU3 275 aa16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 LRRC8EQ6NSJ5 796 aa16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 PRSS41Q7RTY9 318 aa16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 PIWIL4Q7Z3Z4 852 aaKnown RBP16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 VN1R4Q7Z5H5 301 aa16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 CPNE9Q8IYJ1 553 aa16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 UTP23Q9BRU9 249 aaKnown RBP16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 XAB2Q9HCS7 855 aaKnown RBP16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 TEP1Q99973 2627 aaKnown RBP16.65■□□□□ 0.26
SDR39U1-219ENST00000556523 MAGEB16A2A368 324 aa16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 SDR42E2A6NKP2 422 aa16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 SGK494L7N484 410 aa16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 EIF3FO00303 357 aaPredicted RBP16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 SNRPB2P08579 225 aaKnown RBP16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 SLC35G6P0C7Q6 338 aa16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 MLNP12872 115 aa16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 GRK3P35626 688 aa16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 BCL6P41182 706 aa16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 SMSP52788 366 aa16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 TAS2R50P59544 299 aa16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 KCTD19Q17RG1 926 aaPredicted RBP16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 ANKRD22Q5VYY1 191 aa16.64■□□□□ 0.25
SDR39U1-219ENST00000556523 XKRXQ6PP77 449 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms