RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 TRPC1P48995 793 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 INHBCP55103 352 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 OVGP1Q12889 678 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 RAPSNQ13702 412 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 KRT31Q15323 416 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 ITPRIPL2Q3MIP1 535 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 SPDYCQ5MJ68 293 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 C8orf82Q6P1X6 216 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-208ENST00000553278 ODF3L1Q8IXM7 274 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 RNF148Q8N7C7 305 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 NANOGP1Q8N7R0 232 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 SPATA22Q8NHS9 363 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 SHC3Q92529 594 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 NDNQ99608 321 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 MAP3K3Q99759 626 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 URM1Q9BTM9 101 aaKnown RBP5.36□□□□□ -1.55
SCFD1-208ENST00000553278 FTHL17Q9BXU8 183 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 TMEM231Q9H6L2 316 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 RIOX1Q9H6W3 641 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 TLE6Q9H808 572 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 MIS18AQ9NYP9 233 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 CLIP2Q9UDT6 1046 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 SLC12A6Q9UHW9 1150 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 HPCAL4Q9UM19 191 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 NCAPD2Q15021 1401 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 ANKRD61A6NGH8 418 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 GMFGO60234 142 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 FZD7O75084 574 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 PDE9AO76083 593 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 SNX4O95219 450 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 RAF1P04049 648 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 SFTPBP07988 381 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 LINC00271P0C7V0 271 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 HOXB2P14652 356 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 TNFRSF1BP20333 461 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 STIP1P31948 543 aaKnown RBP5.35□□□□□ -1.55
SCFD1-208ENST00000553278 CETN2P41208 172 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 OR3A3P47888 321 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 NUMBP49757 651 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 THOP1P52888 689 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 RPP38P78345 283 aaKnown RBP5.35□□□□□ -1.55
SCFD1-208ENST00000553278 SLC20A2Q08357 652 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 TRAP1Q12931 704 aaKnown RBP5.35□□□□□ -1.55
SCFD1-208ENST00000553278 DMP1Q13316 513 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-208ENST00000553278 CORO6Q6QEF8 472 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 GFRALQ6UXV0 394 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 IL17RELQ6ZVW7 336 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 PRUNE1Q86TP1 453 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 KMT5CQ86Y97 462 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 ZNF573Q86YE8 665 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 ZNF444Q8N0Y2 327 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-208ENST00000553278 PRSS35Q8N3Z0 413 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 SMYD1Q8NB12 490 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 FAM71CQ8NEG0 241 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 SELENOMQ8WWX9 145 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 DDB2Q92466 427 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 LGALS12Q96DT0 336 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 SCMH1Q96GD3 660 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 GUCD1Q96NT3 240 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 COQ7Q99807 217 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 ERP44Q9BS26 406 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 ALKBH7Q9BT30 221 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-208ENST00000553278 ANP32EQ9BTT0 268 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 LRRC2Q9BYS8 371 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 TFB2MQ9H5Q4 396 aaKnown RBP5.35□□□□□ -1.55
SCFD1-208ENST00000553278 CHST11Q9NPF2 352 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 PANK4Q9NVE7 773 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 CNOT2Q9NZN8 540 aaKnown RBP5.35□□□□□ -1.55
SCFD1-208ENST00000553278 ZDHHC2Q9UIJ5 367 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 LAMP5Q9UJQ1 280 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 KCNS2Q9ULS6 477 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 DLGAP4Q9Y2H0 992 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 DMRT1Q9Y5R6 373 aa5.35□□□□□ -1.55
SCFD1-208ENST00000553278 IGLV5-52A0A0A0MRZ9 124 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 C5orf60A6NFR6 353 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 C2orf81A6NN90 581 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 E5RGE8 158 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 E2F3O00716 465 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 APOHP02749 345 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-208ENST00000553278 KRT8P05787 483 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 CHRNGP07510 517 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 PDHBP11177 359 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 GOT1P17174 413 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 ITGA2P17301 1181 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 CYP3A5P20815 502 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 GBX2P52951 348 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-208ENST00000553278 ACTR1AP61163 376 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 LDLRAP1Q5SW96 308 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 UGT3A1Q6NUS8 523 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 FAM171BQ6P995 826 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 RHBDF2Q6PJF5 856 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 RD3Q7Z3Z2 195 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 MRPL10Q7Z7H8 261 aaKnown RBP5.34□□□□□ -1.55
SCFD1-208ENST00000553278 ZNF554Q86TJ5 538 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 RPAINQ86UA6 219 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 TMEM219Q86XT9 240 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 TDHQ8IZJ6 230 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 RBMXL3Q8N7X1 1067 aaKnown RBP5.34□□□□□ -1.55
SCFD1-208ENST00000553278 PRR26Q8N8Z3 221 aa5.34□□□□□ -1.55
SCFD1-208ENST00000553278 ELP5Q8TE02 316 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms