RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 GSTA5Q7RTV2 222 aa14.56□□□□□ -0.08
RAB5C-205ENST00000550013 VN1R4Q7Z5H5 301 aa14.56□□□□□ -0.08
RAB5C-205ENST00000550013 LRRC56Q8IYG6 542 aaPredicted RBP14.56□□□□□ -0.08
RAB5C-205ENST00000550013 PRELID2Q8N945 189 aa14.56□□□□□ -0.08
RAB5C-205ENST00000550013 LURAP1Q96LR2 239 aa14.56□□□□□ -0.08
RAB5C-205ENST00000550013 PRAP1Q96NZ9 151 aa14.56□□□□□ -0.08
RAB5C-205ENST00000550013 SIGLEC12Q96PQ1 595 aa14.56□□□□□ -0.08
RAB5C-205ENST00000550013 HES7Q9BYE0 225 aa14.56□□□□□ -0.08
RAB5C-205ENST00000550013 CHST11Q9NPF2 352 aa14.56□□□□□ -0.08
RAB5C-205ENST00000550013 HCN3Q9P1Z3 774 aa14.56□□□□□ -0.08
RAB5C-205ENST00000550013 TINAGQ9UJW2 476 aa14.56□□□□□ -0.08
RAB5C-205ENST00000550013 GUCA1BQ9UMX6 200 aa14.56□□□□□ -0.08
RAB5C-205ENST00000550013 FAM227AF5H4B4 570 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 H0YIG0 161 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 MYBL2P10244 700 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 IL1RNP18510 177 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 TPSB2P20231 275 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 RPS6KA1Q15418 735 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 CDSNQ15517 529 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 TPSAB1Q15661 275 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 ACER2Q5QJU3 275 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 MEI1Q5TIA1 1274 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 ZNF470Q6ECI4 717 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 H3F3CQ6NXT2 135 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 ZNF549Q6P9A3 640 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 ANKRD37Q7Z713 158 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 FBXO15Q8NCQ5 510 aaPredicted RBP14.55□□□□□ -0.08
RAB5C-205ENST00000550013 OR51Q1Q8NH59 317 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 ASB11Q8WXH4 323 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 NPAS2Q99743 824 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 TRIM8Q9BZR9 551 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 TSPAN10Q9H1Z9 355 aaPredicted RBP14.55□□□□□ -0.08
RAB5C-205ENST00000550013 KLHL1Q9NR64 748 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 ANKRD10Q9NXR5 420 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 MED16Q9Y2X0 877 aa14.55□□□□□ -0.08
RAB5C-205ENST00000550013 GFYI3L273 518 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 SGK494L7N484 410 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 MAN1A2O60476 641 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 NSA2O95478 260 aaKnown RBP14.54□□□□□ -0.08
RAB5C-205ENST00000550013 IMPA1P29218 277 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 SKIV2L2P42285 1042 aaKnown RBP14.54□□□□□ -0.08
RAB5C-205ENST00000550013 XCR1P46094 333 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 CASP6P55212 293 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 TUBA3CQ13748 450 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 TRIP13Q15645 432 aaPredicted RBP14.54□□□□□ -0.08
RAB5C-205ENST00000550013 TTLL9Q3SXZ7 439 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 CASC4Q6P4E1 433 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 TUBA3EQ6PEY2 450 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 CRLF3Q8IUI8 442 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 MDS2Q8NDY4 140 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 ZCCHC10Q8TBK6 192 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 ZNF354BQ96LW1 612 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 EBNA1BP2Q99848 306 aaKnown RBP14.54□□□□□ -0.08
RAB5C-205ENST00000550013 KCNK13Q9HB14 408 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 FBXO6Q9NRD1 293 aaPredicted RBP14.54□□□□□ -0.08
RAB5C-205ENST00000550013 INTS10Q9NVR2 710 aaKnown RBP14.54□□□□□ -0.08
RAB5C-205ENST00000550013 C19orf25Q9UFG5 118 aaPredicted RBP14.54□□□□□ -0.08
RAB5C-205ENST00000550013 SH2B3Q9UQQ2 575 aa14.54□□□□□ -0.08
RAB5C-205ENST00000550013 CTAGE9A4FU28 777 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 C19orf84I3L1E1 186 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 TTI1O43156 1089 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 MPC1LP0DKB6 136 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 PAMP19021 973 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 CD96P40200 585 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 VPS41P49754 854 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 CDK16Q00536 496 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 CTBP1Q13363 440 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 ANKRD22Q5VYY1 191 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 TMEM214Q6NUQ4 689 aaKnown RBP14.53□□□□□ -0.08
RAB5C-205ENST00000550013 XKRXQ6PP77 449 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 CYHR1Q6ZMK1 362 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 NCCRP1Q6ZVX7 275 aaPredicted RBP14.53□□□□□ -0.08
RAB5C-205ENST00000550013 PIWIL4Q7Z3Z4 852 aaKnown RBP14.53□□□□□ -0.08
RAB5C-205ENST00000550013 CAND1Q86VP6 1230 aaKnown RBP14.53□□□□□ -0.08
RAB5C-205ENST00000550013 DENND6AQ8IWF6 608 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 ZNF295-AS1Q8N0V1 137 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 SPC24Q8NBT2 197 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 ADAMTS18Q8TE60 1221 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 ZNF669Q96BR6 464 aaPredicted RBP14.53□□□□□ -0.08
RAB5C-205ENST00000550013 MAGED4Q96JG8 741 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 CCDC138Q96M89 665 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 GPR137Q96N19 417 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 GPR21Q99679 349 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 RBCK1Q9BYM8 510 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 TSGA10Q9BZW7 698 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 TMEM184CQ9NVA4 438 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 VPS9D1Q9Y2B5 631 aa14.53□□□□□ -0.08
RAB5C-205ENST00000550013 FEZF1A0PJY2 475 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 ZNHIT1O43257 154 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 ZBTB14O43829 449 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 RDH16O75452 317 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 FGGP02679 453 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 CYC1P08574 325 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 ESRRAP11474 423 aaPredicted RBP14.52□□□□□ -0.09
RAB5C-205ENST00000550013 COILP38432 576 aaPredicted RBP14.52□□□□□ -0.09
RAB5C-205ENST00000550013 BCL6P41182 706 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 RPS15AP62244 130 aaKnown RBP14.52□□□□□ -0.09
RAB5C-205ENST00000550013 TBPL1P62380 186 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 CSNK1G2P78368 415 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 ALDH6A1Q02252 535 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms