RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 VIPP01282 170 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 UMPSP11172 480 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 COX7A2P14406 83 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 IL10P22301 178 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 HTR1EP28566 365 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 AHRP35869 848 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 CXCL12P48061 93 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 REEP5Q00765 189 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 RHDQ02161 417 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 ZNF763Q0D2J5 394 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 CCNIQ14094 377 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 SF1Q15637 639 aaKnown RBP12.92□□□□□ -0.34
PTCH1-215ENST00000547672 PGS1Q32NB8 556 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 MTX3Q5HYI7 312 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 C6orf10Q5SRN2 563 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 CPTPQ5TA50 214 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 DEPDC1Q5TB30 811 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 NANOGP8Q6NSW7 305 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 IYDQ6PHW0 289 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 CAMKMTQ7Z624 323 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 SPATA24Q86W54 205 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 C1orf52Q8N6N3 182 aaKnown RBP12.92□□□□□ -0.34
PTCH1-215ENST00000547672 LMNTD1Q8N9Z9 388 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 OR13H1Q8NG92 308 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 DNAJB14Q8TBM8 379 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 GTF2H4Q92759 462 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 TMEM125Q96AQ2 219 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 RGMAQ96B86 450 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 C11orf24Q96F05 449 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-215ENST00000547672 DUS3LQ96G46 650 aaKnown RBP12.92□□□□□ -0.34
PTCH1-215ENST00000547672 TMEM74Q96NL1 305 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 GUCD1Q96NT3 240 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 TSSK3Q96PN8 268 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 NANOGQ9H9S0 305 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 DNAAF2Q9NVR5 837 aaKnown RBP12.92□□□□□ -0.34
PTCH1-215ENST00000547672 ACTR3BQ9P1U1 418 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 ANKMY1Q9P2S6 941 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-215ENST00000547672 PLAGL1Q9UM63 463 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 DLGAP4Q9Y2H0 992 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 PRSS51A0A1B0GVH4 220 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 PRORSD1PA6NEY8 169 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 MAP3K13O43283 966 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 OR1F1O43749 312 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 CD1EP15812 388 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 DGKQP52824 942 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 TRA2BP62995 288 aaKnown RBP12.91□□□□□ -0.34
PTCH1-215ENST00000547672 RACK1P63244 317 aaKnown RBP12.91□□□□□ -0.34
PTCH1-215ENST00000547672 RELAQ04206 551 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 LIPEQ05469 1076 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 MTAPQ13126 283 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 FZD5Q13467 585 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 ELOCQ15369 112 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 DUOXA1Q1HG43 343 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 PAGE3Q5JUK9 113 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 SPANXN4Q5MJ08 99 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 LRIF1Q5T3J3 769 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 KHDRBS2Q5VWX1 349 aaKnown RBP12.91□□□□□ -0.34
PTCH1-215ENST00000547672 KLHL35Q6PF15 583 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 SLC2A7Q6PXP3 512 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 DLEU7Q6UYE1 221 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 SLC9B2Q86UD5 537 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 PARGQ86W56 976 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 PTRH1Q86Y79 214 aaKnown RBP12.91□□□□□ -0.34
PTCH1-215ENST00000547672 BHLHE22Q8NFJ8 381 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-215ENST00000547672 OR2A1Q8NGT9 310 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 NELL1Q92832 810 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 THAP11Q96EK4 314 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 PDXPQ96GD0 296 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 HHIPQ96QV1 700 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 THUMPD3Q9BV44 507 aaKnown RBP12.91□□□□□ -0.34
PTCH1-215ENST00000547672 SARGQ9BW04 601 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 ACAT2Q9BWD1 397 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 BHLHE41Q9C0J9 482 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-215ENST00000547672 TMEM168Q9H0V1 697 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 ALG2Q9H553 416 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 REEP4Q9H6H4 257 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 TBC1D17Q9HA65 648 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 MYNNQ9NPC7 610 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 GPR27Q9NS67 375 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 ATP6V1HQ9UI12 483 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 BTNL2Q9UIR0 455 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 MAGEL2Q9UJ55 1249 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 SIT1Q9Y3P8 196 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 PLEKHM1Q9Y4G2 1056 aa12.91□□□□□ -0.34
PTCH1-215ENST00000547672 A0A1W2PPV9 198 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 OR52A4PA6NMU1 304 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 ISM1B1AKI9 464 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 H0Y8X5 98 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 H7BY64 318 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 FXYD1O00168 92 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 NME4O00746 187 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 RFXANKO14593 260 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 PRICKLE3O43900 615 aaPredicted RBP12.9□□□□□ -0.34
PTCH1-215ENST00000547672 TGFB1P01137 390 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 C8BP07358 591 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 TCN1P20061 433 aaPredicted RBP12.9□□□□□ -0.34
PTCH1-215ENST00000547672 CD38P28907 300 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 DPP6P42658 865 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms