RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ZIC2O95409 532 aaPredicted RBP15.11■□□□□ 0.01
DDX54-204ENST00000546898 SLC35G6P0C7Q6 338 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 CD1DP15813 335 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 SLC26A3P40879 764 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 BCL6P41182 706 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 AVPR1BP47901 424 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 PGDP52209 483 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 KLRB1Q12918 225 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 CSHL1Q14406 222 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 TGFBIQ15582 683 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 DCAF10Q5QP82 559 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 ASB18Q6ZVZ8 466 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 CCDC91Q7Z6B0 441 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 ASPGQ86U10 573 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 THOC6Q86W42 341 aaKnown RBP15.11■□□□□ 0.01
DDX54-204ENST00000546898 PTRH1Q86Y79 214 aaKnown RBP15.11■□□□□ 0.01
DDX54-204ENST00000546898 HPS6Q86YV9 775 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 MFSD9Q8NBP5 474 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 STT3BQ8TCJ2 826 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 NEIL2Q969S2 332 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 RHBDF1Q96CC6 855 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 MMABQ96EY8 250 aaPredicted RBP15.11■□□□□ 0.01
DDX54-204ENST00000546898 UBXN10Q96LJ8 280 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 CRB3Q9BUF7 120 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 SOX17Q9H6I2 414 aaPredicted RBP15.11■□□□□ 0.01
DDX54-204ENST00000546898 MKKSQ9NPJ1 570 aaPredicted RBP15.11■□□□□ 0.01
DDX54-204ENST00000546898 NINJ2Q9NZG7 142 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 MAP4K5Q9Y4K4 846 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 KCNE2Q9Y6J6 123 aa15.11■□□□□ 0.01
DDX54-204ENST00000546898 TRBC2A0A5B9 178 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 FEZF1A0PJY2 475 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 H0YIG0 161 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 FOXS1O43638 330 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 FAM155BO75949 473 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 IPO13O94829 963 aaKnown RBP15.1■□□□□ 0.01
DDX54-204ENST00000546898 NSA2O95478 260 aaKnown RBP15.1■□□□□ 0.01
DDX54-204ENST00000546898 ZGLP1P0C6A0 271 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 CRABP2P29373 138 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 SLC6A12P48065 614 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 FOXL2P58012 376 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 REEP5Q00765 189 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 KLC1Q07866 573 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 EFTUD2Q15029 972 aaKnown RBP eCLIP15.1■□□□□ 0.01
DDX54-204ENST00000546898 RBBP7Q16576 425 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 TMEM214Q6NUQ4 689 aaKnown RBP15.1■□□□□ 0.01
DDX54-204ENST00000546898 SLC13A3Q8WWT9 602 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 FUT8Q9BYC5 575 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 TGIF2Q9GZN2 237 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 CDC42EP4Q9H3Q1 356 aaKnown RBP15.1■□□□□ 0.01
DDX54-204ENST00000546898 ACSS3Q9H6R3 686 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 GPR83Q9NYM4 423 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 TRPC4Q9UBN4 977 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 SLC22A14Q9Y267 594 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 HS3ST3B1Q9Y662 390 aa15.1■□□□□ 0.01
DDX54-204ENST00000546898 A0A0A6YYC8 382 aaPredicted RBP15.09■□□□□ 0.01
DDX54-204ENST00000546898 I3L1I5 382 aaPredicted RBP15.09■□□□□ 0.01
DDX54-204ENST00000546898 J3QKU1 62 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 K7EM74 188 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 SOCS6O14544 535 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 PCDH17O14917 1159 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 LCMT2O60294 686 aaKnown RBP15.09■□□□□ 0.01
DDX54-204ENST00000546898 SLC35E2BP0CK96 405 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 NR1D1P20393 614 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 ECHS1P30084 290 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 SOX8P57073 446 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 PWP1Q13610 501 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 TUBB8Q3ZCM7 444 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 CATSPEREQ5SY80 951 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 SHISA6Q6ZSJ9 500 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 RAPH1Q70E73 1250 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 CMC1Q7Z7K0 106 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 TMPRSS11BQ86T26 416 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 TBC1D1Q86TI0 1168 aaPredicted RBP15.09■□□□□ 0.01
DDX54-204ENST00000546898 GPSM1Q86YR5 675 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 GALNT16Q8N428 558 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 AMER3Q8N944 861 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 PDPRQ8NCN5 879 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 FDCSPQ8NFU4 85 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 IFT81Q8WYA0 676 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 KIAA1191Q96A73 305 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 TSNARE1Q96NA8 513 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 AIF1LQ9BQI0 150 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 UNKQ9C0B0 810 aaKnown RBP15.09■□□□□ 0.01
DDX54-204ENST00000546898 CNOT10Q9H9A5 744 aaKnown RBP15.09■□□□□ 0.01
DDX54-204ENST00000546898 ATP13A2Q9NQ11 1180 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 WWOXQ9NZC7 414 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 MRPS2Q9Y399 296 aaKnown RBP15.09■□□□□ 0.01
DDX54-204ENST00000546898 ZNF451Q9Y4E5 1061 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 SLC22A7Q9Y694 548 aa15.09■□□□□ 0.01
DDX54-204ENST00000546898 NDUFS4O43181 175 aa15.08■□□□□ 0
DDX54-204ENST00000546898 OR1F1O43749 312 aa15.08■□□□□ 0
DDX54-204ENST00000546898 WDR47O94967 919 aa15.08■□□□□ 0
DDX54-204ENST00000546898 PDGFAP04085 211 aa15.08■□□□□ 0
DDX54-204ENST00000546898 GNAZP19086 355 aa15.08■□□□□ 0
DDX54-204ENST00000546898 AHRP35869 848 aa15.08■□□□□ 0
DDX54-204ENST00000546898 GGT5P36269 586 aa15.08■□□□□ 0
DDX54-204ENST00000546898 CASRP41180 1078 aa15.08■□□□□ 0
DDX54-204ENST00000546898 SCTRP47872 440 aa15.08■□□□□ 0
DDX54-204ENST00000546898 MEF2AQ02078 507 aaPredicted RBP15.08■□□□□ 0
DDX54-204ENST00000546898 AIMP2Q13155 320 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms