RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 PCDHGA4Q9Y5G9 962 aa19.9■□□□□ 0.78
OTUB1-211ENST00000543004 TRBC2A0A5B9 178 aa19.89■□□□□ 0.77
OTUB1-211ENST00000543004 P2RX6O15547 441 aa19.89■□□□□ 0.77
OTUB1-211ENST00000543004 MAP3K7O43318 606 aa19.89■□□□□ 0.77
OTUB1-211ENST00000543004 H2AFYO75367 372 aaKnown RBP19.89■□□□□ 0.77
OTUB1-211ENST00000543004 MLYCDO95822 493 aa19.89■□□□□ 0.77
OTUB1-211ENST00000543004 EIF2S1P05198 315 aaKnown RBP19.89■□□□□ 0.77
OTUB1-211ENST00000543004 GRK3P35626 688 aa19.89■□□□□ 0.77
OTUB1-211ENST00000543004 SCTRP47872 440 aa19.89■□□□□ 0.77
OTUB1-211ENST00000543004 MAPK10P53779 464 aa19.89■□□□□ 0.77
OTUB1-211ENST00000543004 SNRPNP63162 240 aaKnown RBP19.89■□□□□ 0.77
OTUB1-211ENST00000543004 BST1Q10588 318 aa19.89■□□□□ 0.77
OTUB1-211ENST00000543004 LIPJQ5W064 366 aa19.89■□□□□ 0.77
OTUB1-211ENST00000543004 TMIGD1Q6UXZ0 262 aa19.89■□□□□ 0.77
OTUB1-211ENST00000543004 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.89■□□□□ 0.77
OTUB1-211ENST00000543004 AGR3Q8TD06 166 aa19.89■□□□□ 0.77
OTUB1-211ENST00000543004 SREK1Q8WXA9 508 aaKnown RBP19.89■□□□□ 0.77
OTUB1-211ENST00000543004 PLCL2Q9UPR0 1127 aa19.89■□□□□ 0.77
OTUB1-211ENST00000543004 H3BMH7 237 aa19.88■□□□□ 0.77
OTUB1-211ENST00000543004 PLD2O14939 933 aa19.88■□□□□ 0.77
OTUB1-211ENST00000543004 TIAF1O95411 115 aa19.88■□□□□ 0.77
OTUB1-211ENST00000543004 NEK2P51955 445 aa19.88■□□□□ 0.77
OTUB1-211ENST00000543004 RPS15AP62244 130 aaKnown RBP19.88■□□□□ 0.77
OTUB1-211ENST00000543004 ZRSR2Q15696 482 aaKnown RBP19.88■□□□□ 0.77
OTUB1-211ENST00000543004 HKDC1Q2TB90 917 aa19.88■□□□□ 0.77
OTUB1-211ENST00000543004 ZC3H12BQ5HYM0 836 aaKnown RBP19.88■□□□□ 0.77
OTUB1-211ENST00000543004 VN1R5Q7Z5H4 357 aa19.88■□□□□ 0.77
OTUB1-211ENST00000543004 CUZD1Q86UP6 607 aa19.88■□□□□ 0.77
OTUB1-211ENST00000543004 MFSD9Q8NBP5 474 aa19.88■□□□□ 0.77
OTUB1-211ENST00000543004 OR7G3Q8NG95 312 aa19.88■□□□□ 0.77
OTUB1-211ENST00000543004 MTFMTQ96DP5 389 aaKnown RBP19.88■□□□□ 0.77
OTUB1-211ENST00000543004 SARGQ9BW04 601 aa19.88■□□□□ 0.77
OTUB1-211ENST00000543004 AKAP7Q9P0M2 348 aaPredicted RBP19.88■□□□□ 0.77
OTUB1-211ENST00000543004 WASF3Q9UPY6 502 aa19.88■□□□□ 0.77
OTUB1-211ENST00000543004 TIMM22Q9Y584 194 aa19.88■□□□□ 0.77
OTUB1-211ENST00000543004 TMEM233B4DJY2 109 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 UGDHO60701 494 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 ESRRBO95718 433 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 CAPN1P07384 714 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 PCNAP12004 261 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 SERPINB3P29508 390 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 HNF4AP41235 474 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 MC2RQ01718 297 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 ACY1Q03154 408 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 RELAQ04206 551 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 STX3Q13277 289 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 PAGE2BQ5JRK9 111 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 KRT78Q8N1N4 520 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 WDR36Q8NI36 951 aaKnown RBP19.87■□□□□ 0.77
OTUB1-211ENST00000543004 DYDC1Q8WWB3 177 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 ZNF75CPQ92670 426 aaPredicted RBP19.87■□□□□ 0.77
OTUB1-211ENST00000543004 N4BP2L2Q92802 583 aaPredicted RBP19.87■□□□□ 0.77
OTUB1-211ENST00000543004 MANSC1Q9H8J5 431 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 FARSBQ9NSD9 589 aaKnown RBP19.87■□□□□ 0.77
OTUB1-211ENST00000543004 SCN3AQ9NY46 2000 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 TBX6O95947 436 aaPredicted RBP19.87■□□□□ 0.77
OTUB1-211ENST00000543004 SERPIND1P05546 499 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 MSL3P1P0C860 447 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 JMJD7P0C870 316 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 CXCR2P25025 360 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 SLC1A6P48664 564 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 PKNOX1P55347 436 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 ABCE1P61221 599 aaKnown RBP19.87■□□□□ 0.77
OTUB1-211ENST00000543004 LAPTM5Q13571 262 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 DDX39BQ13838 428 aaKnown RBP19.87■□□□□ 0.77
OTUB1-211ENST00000543004 WASHC2DQ5SRD0 308 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 CLEC6AQ6EIG7 209 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 MED27Q6P2C8 311 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 LAS2Q8IYD9 372 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 GRAMD1AQ96CP6 724 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 HBEGFQ99075 208 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 SORT1Q99523 831 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 TRMOQ9BU70 441 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 SCNM1Q9BWG6 230 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 SLC39A1Q9NY26 324 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 TRPS1Q9UHF7 1281 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 ZDHHC2Q9UIJ5 367 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 FIS1Q9Y3D6 152 aa19.87■□□□□ 0.77
OTUB1-211ENST00000543004 SH3BGRLO75368 114 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 HTR6P50406 440 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 CAMK2BQ13554 666 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 HIST2H2ACQ16777 129 aaPredicted RBP19.86■□□□□ 0.77
OTUB1-211ENST00000543004 GGTA1PQ4G0N0 100 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 SGO1Q5FBB7 561 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 HIST2H2AA3Q6FI13 130 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 DTWD1Q8N5C7 304 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 WDR20Q8TBZ3 569 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 METTL6Q8TCB7 284 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 CREB3L4Q8TEY5 395 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 SLC13A3Q8WWT9 602 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 TM4SF19Q96DZ7 209 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 ZNF285Q96NJ3 590 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 MTERF1Q99551 399 aaKnown RBP19.86■□□□□ 0.77
OTUB1-211ENST00000543004 FBXO8Q9NRD0 319 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 IRAK4Q9NWZ3 460 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 ZFP69BQ9UJL9 534 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 RARRES3Q9UL19 164 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 AP1M2Q9Y6Q5 423 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 FREM2Q5SZK8 3169 aa19.86■□□□□ 0.77
OTUB1-211ENST00000543004 TMEM114B3SHH9 223 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms