RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 IYDQ6PHW0 289 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 ADCK2Q7Z695 626 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 TAF8Q7Z7C8 310 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 AMIGO1Q86WK6 493 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 C1orf52Q8N6N3 182 aaKnown RBP10.59□□□□□ -0.71
SCG3-202ENST00000542355 GLB1L3Q8NCI6 653 aaPredicted RBP10.59□□□□□ -0.71
SCG3-202ENST00000542355 FAM156AQ8NDB6 213 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 CHTF18Q8WVB6 975 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 PATE1Q8WXA2 126 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 RELTQ969Z4 430 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 CRELD1Q96HD1 420 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 HOPXQ9BPY8 73 aaPredicted RBP10.59□□□□□ -0.71
SCG3-202ENST00000542355 AIF1LQ9BQI0 150 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 GSDMCQ9BYG8 508 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 CD320Q9NPF0 282 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 DMRT3Q9NQL9 472 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 SPHK1Q9NYA1 384 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 TAAR2Q9P1P5 351 aa10.59□□□□□ -0.71
SCG3-202ENST00000542355 RUVBL1Q9Y265 456 aaKnown RBP10.59□□□□□ -0.71
SCG3-202ENST00000542355 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 DYTNA2CJ06 578 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 K7ESF4 209 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 MYO1DO94832 1006 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 ME2P23368 584 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 SLC7A2P52569 658 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 PRRT3Q5FWE3 981 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 SPANXN4Q5MJ08 99 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 C10orf62Q5T681 223 aaPredicted RBP10.58□□□□□ -0.72
SCG3-202ENST00000542355 PARGQ86W56 976 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 SYT12Q8IV01 421 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 SFTPA2Q8IWL1 248 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 TMEFF1Q8IYR6 380 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 MINDY1Q8N5J2 469 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 HIPK4Q8NE63 616 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 OR4K1Q8NGD4 311 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 DNAJB14Q8TBM8 379 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 STMN2Q93045 179 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 C11orf24Q96F05 449 aaPredicted RBP10.58□□□□□ -0.72
SCG3-202ENST00000542355 HSPA12BQ96MM6 686 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 GPATCH1Q9BRR8 931 aaKnown RBP10.58□□□□□ -0.72
SCG3-202ENST00000542355 CLMPQ9H6B4 373 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 PELI2Q9HAT8 420 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 NMRK1Q9NWW6 199 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 TMEM181Q9P2C4 612 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 IGKV1-8A0A0C4DH67 115 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 PRORSD1PA6NEY8 169 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 ANKDD1BA6NHY2 528 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 ISM1B1AKI9 464 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 FXYD1O00168 92 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 OR1F1O43749 312 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 PRICKLE3O43900 615 aaPredicted RBP10.58□□□□□ -0.72
SCG3-202ENST00000542355 KRT36O76013 467 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 IL6P05231 212 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 PGRP06401 933 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 ACPPP15309 386 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 JUNDP17535 347 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 XRCC1P18887 633 aaPredicted RBP10.58□□□□□ -0.72
SCG3-202ENST00000542355 SHMT2P34897 504 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 PIK3CBP42338 1070 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 BLKP51451 505 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 ATXN3P54252 364 aaPredicted RBP10.58□□□□□ -0.72
SCG3-202ENST00000542355 CYP4F2P78329 520 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 RAE1P78406 368 aaKnown RBP10.58□□□□□ -0.72
SCG3-202ENST00000542355 PHEXP78562 749 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 MS4A2Q01362 244 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 DMWDQ09019 674 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 CCDC6Q16204 474 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 SPIN4Q56A73 249 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 VN1R5Q7Z5H4 357 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 PLD3Q8IV08 490 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 TRIM48Q8IWZ4 208 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.58□□□□□ -0.72
SCG3-202ENST00000542355 FAM9CQ8IZT9 166 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 ANKRD53Q8N9V6 530 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 MFSD2AQ8NA29 543 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 CDC26Q8NHZ8 85 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 METTL2AQ96IZ6 378 aaKnown RBP10.58□□□□□ -0.72
SCG3-202ENST00000542355 FCRL1Q96LA6 429 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 TRIM8Q9BZR9 551 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 SRMSQ9H3Y6 488 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 MRPS30Q9NP92 439 aaKnown RBP10.58□□□□□ -0.72
SCG3-202ENST00000542355 OR6C2Q9NZP2 312 aa10.58□□□□□ -0.72
SCG3-202ENST00000542355 NKX1-2Q9UD57 310 aaPredicted RBP10.58□□□□□ -0.72
SCG3-202ENST00000542355 APOBEC3BQ9UH17 382 aaKnown RBP10.58□□□□□ -0.72
SCG3-202ENST00000542355 A0A1W2PR77 199 aa10.57□□□□□ -0.72
SCG3-202ENST00000542355 C3orf80F5H4A9 247 aa10.57□□□□□ -0.72
SCG3-202ENST00000542355 AKAP10O43572 662 aa10.57□□□□□ -0.72
SCG3-202ENST00000542355 LCMT2O60294 686 aaKnown RBP10.57□□□□□ -0.72
SCG3-202ENST00000542355 VIPP01282 170 aa10.57□□□□□ -0.72
SCG3-202ENST00000542355 GBAP04062 536 aa10.57□□□□□ -0.72
SCG3-202ENST00000542355 CHRM5P08912 532 aaPredicted RBP10.57□□□□□ -0.72
SCG3-202ENST00000542355 ANXA4P09525 319 aaPredicted RBP10.57□□□□□ -0.72
SCG3-202ENST00000542355 BCKDHBP21953 392 aa10.57□□□□□ -0.72
SCG3-202ENST00000542355 SLC6A2P23975 617 aa10.57□□□□□ -0.72
SCG3-202ENST00000542355 PTX3P26022 381 aaPredicted RBP10.57□□□□□ -0.72
SCG3-202ENST00000542355 PEBP1P30086 187 aaKnown RBP10.57□□□□□ -0.72
SCG3-202ENST00000542355 CSNK1G2P78368 415 aa10.57□□□□□ -0.72
SCG3-202ENST00000542355 PLCL1Q15111 1095 aa10.57□□□□□ -0.72
SCG3-202ENST00000542355 MAPKAPK3Q16644 382 aa10.57□□□□□ -0.72
SCG3-202ENST00000542355 PGS1Q32NB8 556 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms