RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 IL23AQ9NPF7 189 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 HEPACAM2A8MVW5 462 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 WWP2O00308 870 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 B4GALT2O60909 372 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 PRAMEF12O95522 483 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 H1F0P07305 194 aaKnown RBP11.9□□□□□ -0.5
CIT-208ENST00000537607 NUDT6P53370 316 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 GSCP56915 257 aaPredicted RBP11.9□□□□□ -0.5
CIT-208ENST00000537607 ZNF763Q0D2J5 394 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 ELAVL3Q14576 367 aaKnown RBP11.9□□□□□ -0.5
CIT-208ENST00000537607 DHCR24Q15392 516 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 PDCD4Q53EL6 469 aaKnown RBP11.9□□□□□ -0.5
CIT-208ENST00000537607 NANOGP8Q6NSW7 305 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 NOXRED1Q6NXP6 359 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 IKBIPQ70UQ0 350 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 ERMP1Q7Z2K6 904 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 SLC30A8Q8IWU4 369 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 TSEN15Q8WW01 171 aaKnown RBP11.9□□□□□ -0.5
CIT-208ENST00000537607 RAB8BQ92930 207 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 RTP4Q96DX8 246 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 NANOGQ9H9S0 305 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 ZNF222Q9UK12 451 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 ZCWPW2A0A1B0GU75 182 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 A8MU76 341 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 HNRNPA1P09651 372 aaKnown RBP eCLIP11.9□□□□□ -0.5
CIT-208ENST00000537607 XKP51811 444 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 KIAA1161Q6NSJ0 714 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 GRHL3Q8TE85 626 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 PGAP3Q96FM1 320 aaPredicted RBP11.9□□□□□ -0.5
CIT-208ENST00000537607 LRIG1Q96JA1 1093 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 HSH2DQ96JZ2 352 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 RANBP9Q96S59 729 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 GPER1Q99527 375 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 TBX5Q99593 518 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 P2RY13Q9BPV8 354 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 RETREG1Q9H6L5 497 aa11.9□□□□□ -0.5
CIT-208ENST00000537607 MYH3P11055 1940 aa11.9□□□□□ -0.51
CIT-208ENST00000537607 MAGEB3O15480 346 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 KAT7O95251 611 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 EGFLAMQ63HQ2 1017 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 TSPAN33Q86UF1 283 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 ATCAYQ86WG3 371 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 OR52B6Q8NGF0 335 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 NEUROD4Q9HD90 331 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 CKLFQ9UBR5 152 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 ZNF99A8MXY4 864 aaPredicted RBP11.89□□□□□ -0.51
CIT-208ENST00000537607 KLHL18O94889 574 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 POLR2CP19387 275 aaPredicted RBP11.89□□□□□ -0.51
CIT-208ENST00000537607 CCKBRP32239 447 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 MTTPP55157 894 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 KLHL24Q6TFL4 600 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 LRRC17Q8N6Y2 441 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 SMPDL3BQ92485 455 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 PYURFQ96I23 114 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 IL17FQ96PD4 163 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 GORASP1Q9BQQ3 440 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 TBL1XR1Q9BZK7 514 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 MKS1Q9NXB0 559 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 FAM53CQ9NYF3 392 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 ERVK-11Q9UQG0 969 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 ARHGEF33A8MVX0 844 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 CBFA2T3O75081 653 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 GSRP00390 522 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 MLLT3P42568 568 aaPredicted RBP11.89□□□□□ -0.51
CIT-208ENST00000537607 NPTX1Q15818 432 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 CARTPTQ16568 116 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 TRAM1L1Q8N609 369 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 PACRGLQ8N7B6 248 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 NEK7Q8TDX7 302 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 MKKSQ9NPJ1 570 aaPredicted RBP11.89□□□□□ -0.51
CIT-208ENST00000537607 MAN2B2Q9Y2E5 1009 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 UBR2Q8IWV8 1755 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 KLF8O95600 359 aaPredicted RBP11.89□□□□□ -0.51
CIT-208ENST00000537607 ID2Q02363 134 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 RAB2BQ8WUD1 216 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 PDCD10Q9BUL8 212 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 TIMMDC1Q9NPL8 285 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 CDC14AQ9UNH5 594 aa11.89□□□□□ -0.51
CIT-208ENST00000537607 WBP11Q9Y2W2 641 aaKnown RBP11.89□□□□□ -0.51
CIT-208ENST00000537607 RPL36Q9Y3U8 105 aaKnown RBP11.89□□□□□ -0.51
CIT-208ENST00000537607 ELOA3DA6NLF2 546 aaPredicted RBP11.88□□□□□ -0.51
CIT-208ENST00000537607 ZBTB42B2RXF5 422 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 AURKAO14965 403 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 ADH1BP00325 375 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 ELOA3BQ3SY89 546 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 ZNF789Q5FWF6 425 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 MCEMP1Q8IX19 187 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 ELOA3Q8NG57 546 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 SMARCD2Q92925 531 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 RNF31Q96EP0 1072 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 CCDC106Q9BWC9 280 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 COMMD9Q9P000 198 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 RIMKLBQ9ULI2 386 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 A0A0U1RQS6 177 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 ZNF860A6NHJ4 632 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 DFNA5O60443 496 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 CLIC3O95833 236 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 RLN1P04808 185 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 FPR1P21462 350 aa11.88□□□□□ -0.51
CIT-208ENST00000537607 SDC2P34741 201 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms