RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 NEIL2Q969S2 332 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 MIEF2Q96C03 454 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 EPN3Q9H201 632 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 SOX17Q9H6I2 414 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 CAB39LQ9H9S4 337 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 MKKSQ9NPJ1 570 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 C14orf105Q9NVL8 296 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 GPR83Q9NYM4 423 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 C5AR2Q9P296 337 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 G3BP2Q9UN86 482 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 ZNF451Q9Y4E5 1061 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 NBASA2RRP1 2371 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 RELNP78509 3460 aa16.33■□□□□ 0.21
SFSWAP-205ENST00000537164 TRBC2A0A5B9 178 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 FEZF1A0PJY2 475 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 H0YIG0 161 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 PCDH17O14917 1159 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 KLHL41O60662 606 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 NSA2O95478 260 aaKnown RBP16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 ATXN8OSP0DMR3 200 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 RAB10P61026 200 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 SNRPNP63162 240 aaKnown RBP16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 TLE1Q04724 770 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 MYBPC3Q14896 1274 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 TGFBIQ15582 683 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 GLE1Q53GS7 698 aaKnown RBP16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 VWA2Q5GFL6 755 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 ATG9BQ674R7 924 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 CTAGE3PQ8IX95 158 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 GALNT16Q8N428 558 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 TEX19Q8NA77 164 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 MFSD9Q8NBP5 474 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 NOA1Q8NC60 698 aaKnown RBP16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 ALKBH8Q96BT7 664 aaKnown RBP16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 RHBDF1Q96CC6 855 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 MMABQ96EY8 250 aaPredicted RBP16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 ATP13A2Q9NQ11 1180 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 DMGDHQ9UI17 866 aaKnown RBP16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 MRPS2Q9Y399 296 aaKnown RBP16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 SLC22A7Q9Y694 548 aa16.33■□□□□ 0.2
SFSWAP-205ENST00000537164 A0A0A6YYC8 382 aaPredicted RBP16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 I3L1I5 382 aaPredicted RBP16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 PHGDHO43175 533 aaKnown RBP16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 WISP1O95388 367 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 CCDC166P0CW27 439 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 CD1DP15813 335 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 GGT5P36269 586 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 SLC6A12P48065 614 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 CSRP3P50461 194 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 ATP6V0D1P61421 351 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 AIMP2Q13155 320 aaKnown RBP16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 CSHL1Q14406 222 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 VWA5B1Q5TIE3 1220 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 SHISA6Q6ZSJ9 500 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 CEP128Q6ZU80 1094 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 ASPGQ86U10 573 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 LAPTM4BQ86VI4 370 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 THOC6Q86W42 341 aaKnown RBP16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 PPM1NQ8N819 430 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 OR11G2Q8NGC1 345 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 SLC13A3Q8WWT9 602 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 SLC5A11Q8WWX8 675 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 ZNF592Q92610 1267 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 VPS50Q96JG6 964 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 CRB3Q9BUF7 120 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 FUT8Q9BYC5 575 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 TSPYL1Q9H0U9 437 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 PELI2Q9HAT8 420 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 SCN3AQ9NY46 2000 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 TRPC4Q9UBN4 977 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 FBXL4Q9UKA2 621 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 SLC22A14Q9Y267 594 aa16.32■□□□□ 0.2
SFSWAP-205ENST00000537164 CTAGE15A4D2H0 777 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 FAM155BO75949 473 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 CYC1P08574 325 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 SLC35G6P0C7Q6 338 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 CTAGE8P0CG41 777 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 AHRP35869 848 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 AVPR1BP47901 424 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 PWP1Q13610 501 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 RBBP7Q16576 425 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 TUBB8Q3ZCM7 444 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 CATSPEREQ5SY80 951 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 IGFL3Q6UXB1 125 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 FRA10AC1Q70Z53 315 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 CTAGE6Q86UF2 777 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 CTAGE4Q8IX94 777 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 AFAP1L2Q8N4X5 818 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 KCT2Q8NC54 265 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 EGFL8Q99944 293 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 SPNS1Q9H2V7 528 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 ZNF552Q9H707 407 aaPredicted RBP16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 C3orf18Q9UK00 162 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 KCNE2Q9Y6J6 123 aa16.31■□□□□ 0.2
SFSWAP-205ENST00000537164 A6NL46 340 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 IDSB3KWA1 339 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 DPM1O60762 260 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 SLC35E2BP0CK96 405 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 SCTRP47872 440 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 REEP5Q00765 189 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms