RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 CCDC166P0CW27 439 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 NCF1P14598 390 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-206ENST00000536398 CASRP41180 1078 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 GDF5P43026 501 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 KCNC1P48547 511 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 EFNA3P52797 238 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 RRADP55042 308 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 OCA2Q04671 838 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 DSG2Q14126 1118 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 OR4D1Q15615 310 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 IGFBP7Q16270 282 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 GARNL3Q5VVW2 1013 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 CMC1Q7Z7K0 106 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 THOC6Q86W42 341 aaKnown RBP13.55□□□□□ -0.24
UBE3B-206ENST00000536398 GALNT16Q8N428 558 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 TEX19Q8NA77 164 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 MFSD9Q8NBP5 474 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 SLC5A11Q8WWX8 675 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 ATL1Q8WXF7 558 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 C8orf44Q96CB5 159 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 MRRFQ96E11 262 aaKnown RBP13.55□□□□□ -0.24
UBE3B-206ENST00000536398 FER1L6-AS2Q96M78 137 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 IP6K3Q96PC2 410 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 CRB3Q9BUF7 120 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 MFRPQ9BY79 579 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 DERL2Q9GZP9 239 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 DRC3Q9H069 523 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 TXNDC16Q9P2K2 825 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 TRPC4Q9UBN4 977 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 CDC14AQ9UNH5 594 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 SLC22A14Q9Y267 594 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 OARD1Q9Y530 152 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 TXNDC9O14530 226 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 TAPBPO15533 448 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 OR1F1O43749 312 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 JRKO75564 520 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 B3GALT4O96024 378 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 ANXA5P08758 320 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 CD1DP15813 335 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 IL1RNP18510 177 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 STX2P32856 288 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 CD97P48960 835 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 CCR8P51685 355 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 MLLT10P55197 1068 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 DLG1Q12959 904 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 FAM53BQ14153 422 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 CSHL1Q14406 222 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 ZKSCAN8Q15776 578 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-206ENST00000536398 RBBP7Q16576 425 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 FBXO48Q5FWF7 155 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 GRTP1Q5TC63 336 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 FAAH2Q6GMR7 532 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 TMEM214Q6NUQ4 689 aaKnown RBP13.54□□□□□ -0.24
UBE3B-206ENST00000536398 ASPGQ86U10 573 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 ZCCHC10Q8TBK6 192 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 SLC13A3Q8WWT9 602 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 IFT81Q8WYA0 676 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 ESAMQ96AP7 390 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 THAP11Q96EK4 314 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 MVB12AQ96EY5 273 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 SMAD5Q99717 465 aaKnown RBP13.54□□□□□ -0.24
UBE3B-206ENST00000536398 EGFL8Q99944 293 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 ZBTB20Q9HC78 741 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-206ENST00000536398 SEMA3GQ9NS98 782 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 GPR83Q9NYM4 423 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 NINJ2Q9NZG7 142 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 C3orf18Q9UK00 162 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 NXT1Q9UKK6 140 aaKnown RBP13.54□□□□□ -0.24
UBE3B-206ENST00000536398 RELNP78509 3460 aa13.54□□□□□ -0.24
UBE3B-206ENST00000536398 HMX2A2RU54 273 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 OR2W5A6NFC9 320 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 SGK494L7N484 410 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 DNAJB6O75190 326 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 WISP1O95388 367 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 STMN1P16949 149 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 VARSP26640 1264 aaKnown RBP13.53□□□□□ -0.24
UBE3B-206ENST00000536398 ECHS1P30084 290 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 SPRP35270 261 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-206ENST00000536398 GRK3P35626 688 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 RAB10P61026 200 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 CDKL1Q00532 357 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 Q0VFX4 171 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 SLMAPQ14BN4 828 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 NDUFA9Q16795 377 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 NXPE4Q6UWF7 544 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 FRA10AC1Q70Z53 315 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 ADAMTSL2Q86TH1 951 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 PDSS2Q86YH6 399 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 ZC3H7AQ8IWR0 971 aaKnown RBP13.53□□□□□ -0.24
UBE3B-206ENST00000536398 PARP9Q8IXQ6 854 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 RBMXL3Q8N7X1 1067 aaKnown RBP13.53□□□□□ -0.24
UBE3B-206ENST00000536398 CLEC1AQ8NC01 280 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 CAMKVQ8NCB2 501 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 OR11G2Q8NGC1 345 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 RHBDF1Q96CC6 855 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 TSPAN17Q96FV3 270 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 UBXN10Q96LJ8 280 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 ZNF552Q9H707 407 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-206ENST00000536398 ATP13A2Q9NQ11 1180 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 LUZP4Q9P127 313 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms