RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 AGAP11Q8TF27 550 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CA5BP1Q8WTZ4 195 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 PSMF1Q92530 271 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 TMEM125Q96AQ2 219 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 PTERQ96BW5 349 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 C8orf44Q96CB5 159 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF653Q96CK0 615 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 EID2BQ96D98 161 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CXorf40BQ96DE9 158 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 C18orf8Q96DM3 657 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 SCRN2Q96FV2 425 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 LRFN5Q96NI6 719 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 GPATCH1Q9BRR8 931 aaKnown RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CINPQ9BW66 212 aaPredicted RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 POLDIP3Q9BY77 421 aaKnown RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 HES7Q9BYE0 225 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 FAM83DQ9H4H8 585 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 LRRC19Q9H756 370 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 MAGEF1Q9HAY2 307 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF160Q9HCG1 818 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 FAM60AQ9NP50 221 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 POT1Q9NUX5 634 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 SOHLH2Q9NX45 425 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 H2AFY2Q9P0M6 372 aaPredicted RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 STOX2Q9P2F5 926 aaPredicted RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 KLHL42Q9P2K6 505 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 DHCR7Q9UBM7 475 aaKnown RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 DKK2Q9UBU2 259 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CDC23Q9UJX2 597 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 TMPRSS11EQ9UL52 423 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 NPIPA1Q9UND3 350 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF835Q9Y2P0 537 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 MORC2Q9Y6X9 1032 aaPredicted RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CMYA5Q8N3K9 4069 aa2.84□□□□□ -1.96
CHMP4A-208ENST00000534106 BIRC6Q9NR09 4857 aa2.84□□□□□ -1.96
CHMP4A-208ENST00000534106 SEC16AO15027 2179 aa2.84□□□□□ -1.96
CHMP4A-208ENST00000534106 SVEP1Q4LDE5 3571 aa2.84□□□□□ -1.96
CHMP4A-208ENST00000534106 HIVEP2P31629 2446 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 OR5K3A6NET4 321 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 TRIM64A6NGJ6 449 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 TRIM64BA6NI03 449 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 OR5K4A6NMS3 321 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 H7C1Q1 480 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 AGPSO00116 658 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 BTN3A3O00478 584 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 SLC16A3O15427 465 aaKnown RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 PRAMEF2O60811 474 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ZWINTO95229 277 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 RASAL1O95294 804 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ZBTB11O95625 1053 aaPredicted RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 TPOP07202 933 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 HOXD4P09016 255 aaPredicted RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ST6GAL1P15907 406 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ITGAXP20702 1163 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 AGAP20933 346 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 AGXTP21549 392 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 CDH3P22223 829 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 IDSP22304 550 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 FDXRP22570 491 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 DNASE1P24855 282 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 MSNP26038 577 aaKnown RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 RFC1P35251 1148 aaPredicted RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 SPAM1P38567 509 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 HADHAP40939 763 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 NEK2P51955 445 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 STC1P52823 247 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 YBEYP58557 167 aaPredicted RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 DCDP81605 110 aaKnown RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 FKBP3Q00688 224 aaKnown RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 FOLH1Q04609 750 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 NSUN2Q08J23 767 aaKnown RBP eCLIP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 AIMP2Q13155 320 aaKnown RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 MYBPHQ13203 477 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 MTA1Q13330 715 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 MFAP5Q13361 173 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 PNOCQ13519 176 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 CUL4AQ13619 759 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 GRM3Q14832 879 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 RABEP1Q15276 862 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 TERF2Q15554 542 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ZIC1Q15915 447 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 LONRF1Q17RB8 773 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 INSCQ1MX18 579 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 DEFB110Q30KQ9 67 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 PARP15Q460N3 678 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 CCDC40Q4G0X9 1142 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 TMTC4Q5T4D3 741 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 CES4AQ5XG92 561 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ALS2CLQ60I27 953 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 FCRLBQ6BAA4 426 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 FCRL6Q6DN72 434 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ARMC6Q6NXE6 501 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 MTFR2Q6P444 385 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 DRICH1Q6PGQ1 229 aaPredicted RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 WDR59Q6PJI9 974 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ISLR2Q6UXK2 745 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 TRIM72Q6ZMU5 477 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 FRMD7Q6ZUT3 714 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 LHFPL2Q6ZUX7 228 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms