RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 TAF4O00268 1085 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 TXNDC9O14530 226 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 SLC22A2O15244 555 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 PIP5K1CO60331 668 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 CIDEAO60543 219 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 PLOD3O60568 738 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 PTP4A3O75365 173 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 OR7A10O76100 309 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 HEXIM1O94992 359 aaKnown RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 TRIM16O95361 564 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 PSMG1O95456 288 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 AFPP02771 609 aaKnown RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 ACAA1P09110 424 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 POLR2MP0CAP2 368 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 ZCCHC18P0CG32 403 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 HSMCR30P0CW71 290 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 THEGLP0DJG4 465 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 PEPDP12955 493 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 UNGP13051 313 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 ENO3P13929 434 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 POU2F1P14859 743 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 ETS2P15036 469 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 DPEP1P16444 411 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 GJA1P17302 382 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 HOXB8P17481 243 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 PON1P27169 355 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 SERPINB5P36952 375 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 AVPR1AP37288 418 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 ETV5P41161 510 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 HCAR3P49019 387 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 NPY2RP49146 381 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 CLCNKBP51801 687 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 PRELPP51888 382 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 GAS1P54826 345 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 FOLH1Q04609 750 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 FOXO1Q12778 655 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 KRR1Q13601 381 aaKnown RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 FASTKD3Q14CZ7 662 aaKnown RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 OXA1LQ15070 435 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 TRADDQ15628 312 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 MAPK6Q16659 721 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 MTHFSDQ2M296 383 aaKnown RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 KCTD21Q4G0X4 260 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 AARDQ4LEZ3 155 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 CEP55Q53EZ4 464 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 ESCO2Q56NI9 601 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 RUNDC3AQ59EK9 446 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 C1orf141Q5JVX7 400 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 FNBP1LQ5T0N5 605 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 FAM83BQ5T0W9 1011 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 TMEM268Q5VZI3 342 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 HEPHL1Q6MZM0 1159 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 IYDQ6PHW0 289 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 C4orf50Q6ZRC1 276 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 SETD3Q86TU7 594 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 ZNF410Q86VK4 478 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 WDR49Q8IV35 697 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 BBS7Q8IWZ6 715 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 LRRC57Q8N9N7 239 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 TC2NQ8N9U0 490 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 CATSPER1Q8NEC5 780 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 CMASQ8NFW8 434 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 VANGL1Q8TAA9 524 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 ZNF420Q8TAQ5 688 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 TBC1D16Q8TBP0 767 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 SLC35F5Q8WV83 523 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 ASZ1Q8WWH4 475 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 C3orf49Q96BT1 292 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 PGM2Q96G03 612 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 TMEM80Q96HE8 168 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 TXNDC15Q96J42 360 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 AK8Q96MA6 479 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 INPP4AQ96PE3 977 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 PIP5K1AQ99755 562 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 DDX50Q9BQ39 737 aaKnown RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 HERPUD2Q9BSE4 406 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 CADM1Q9BY67 442 aaKnown RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 FRMD8Q9BZ67 464 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.12□□□□□ -1.751e-13■■■■□ 20.9
ITGB1-219ENST00000534049 ABCG8Q9H221 673 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 CUEDC2Q9H467 287 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 TFB2MQ9H5Q4 396 aaKnown RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 C6orf106Q9H6K1 298 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 DHX33Q9H6R0 707 aaKnown RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 SMYD2Q9NRG4 433 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 RASSF1Q9NS23 344 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 GIMAP4Q9NUV9 329 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 INTS10Q9NVR2 710 aaKnown RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 TMEM248Q9NWD8 314 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 NPAP1Q9NZP6 1156 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 ERVK-19Q9WJR5 959 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 ENTPD4Q9Y227 616 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 OSGIN2Q9Y236 505 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 GINS2Q9Y248 185 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 SRPRBQ9Y5M8 271 aaKnown RBP4.12□□□□□ -1.75
ITGB1-219ENST00000534049 SALL1Q9NSC2 1324 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 HEG1Q9ULI3 1381 aa4.12□□□□□ -1.75
ITGB1-219ENST00000534049 WDR90Q96KV7 1748 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms