RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 RP1P56715 2156 aa20.22■□□□□ 0.83
PTP4A2-215ENST00000533408 HAT1O14929 419 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 ZSCAN9O15535 394 aaPredicted RBP20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 HBQ1P09105 142 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 ATP1A2P50993 1020 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 EMP3P54852 163 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 YBX1P67809 324 aaKnown RBP20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 GRM7Q14831 915 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 C16orf72Q14CZ0 275 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 ZIC1Q15915 447 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 CPSF6Q16630 551 aaKnown RBP eCLIP20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 FAM214AQ32MH5 1076 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 NIPAL1Q6NVV3 410 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 CEACAM20Q6UY09 585 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 ZCCHC23Q6ZST2 131 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 CLYBLQ8N0X4 340 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 LSMEM2Q8N112 164 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 AGAP11Q8TF27 550 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 ZNF75CPQ92670 426 aaPredicted RBP20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 MAGEB18Q96M61 343 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 OR2A5Q96R48 311 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 OR6C1Q96RD1 312 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 CCT7Q99832 543 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 RHBGQ9H310 441 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 FAM60AQ9NP50 221 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 ENAMQ9NRM1 1142 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 SLC39A1Q9NY26 324 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 RNF11Q9Y3C5 154 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 PCDHGA4Q9Y5G9 962 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 DMDP11532 3685 aa20.21■□□□□ 0.83
PTP4A2-215ENST00000533408 WDR87Q6ZQQ6 2873 aa20.2■□□□□ 0.83
PTP4A2-215ENST00000533408 CASC3O15234 703 aaKnown RBP20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 CTSVO60911 334 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 ULK1O75385 1050 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 CLEC3AO75596 197 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 OR2B3O76000 313 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 UROSP10746 265 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 TSPAN8P19075 237 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 ARSFP54793 590 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 ITGA1P56199 1179 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 SKP1P63208 163 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 SH3BP2P78314 561 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 TGM3Q08188 693 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 ZRSR2Q15696 482 aaKnown RBP20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 NDUFA9Q16795 377 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 DCAF12Q5T6F0 453 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 FRG2Q64ET8 278 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 CHSY3Q70JA7 882 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 DGLUCYQ7Z3D6 616 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 ASPGQ86U10 573 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 CUZD1Q86UP6 607 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 PPP1R3BQ86XI6 285 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 TTC29Q8NA56 475 aaPredicted RBP20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 OR7G3Q8NG95 312 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 CKAP2Q8WWK9 683 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 SLC13A3Q8WWT9 602 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 CCT6BQ92526 530 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 FAR2Q96K12 515 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 FRG2BQ96QU4 278 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 TAAR9Q96RI9 348 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 RAP2CQ9Y3L5 183 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 PCDHGA8Q9Y5G5 932 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 UNC13CQ8NB66 2214 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 ANKRD12Q6UB98 2062 aa20.2■□□□□ 0.82
PTP4A2-215ENST00000533408 PCM1Q15154 2024 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 FEZF1A0PJY2 475 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 TMEM150CB9EJG8 249 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 SLCO1B7G3V0H7 640 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 FOXE1O00358 373 aaPredicted RBP20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 OR4F21O95013 312 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 SERPINA6P08185 405 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 PCNAP12004 261 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 FGF5P12034 268 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 FOLR1P15328 257 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 HK2P52789 917 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 ERVPABLB-1P60509 514 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 STXBP1P61764 594 aaKnown RBP20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 MEF2AQ02078 507 aaPredicted RBP20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 BST1Q10588 318 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 TUBB8Q3ZCM7 444 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 GARNL3Q5VVW2 1013 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 RPS27LQ71UM5 84 aaKnown RBP20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 SYVN1Q86TM6 617 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 CDYL2Q8N8U2 506 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 SRFBP1Q8NEF9 429 aaKnown RBP20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 CDK15Q96Q40 435 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 DDA1Q9BW61 102 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 POLR1BQ9H9Y6 1135 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 SIDT1Q9NXL6 827 aaKnown RBP20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 PPT2Q9UMR5 302 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 SRPK3Q9UPE1 567 aa20.19■□□□□ 0.82
PTP4A2-215ENST00000533408 H0YGG7 62 aa20.18■□□□□ 0.82
PTP4A2-215ENST00000533408 AZIN1O14977 448 aa20.18■□□□□ 0.82
PTP4A2-215ENST00000533408 EIF2S1P05198 315 aaKnown RBP20.18■□□□□ 0.82
PTP4A2-215ENST00000533408 CAPN1P07384 714 aa20.18■□□□□ 0.82
PTP4A2-215ENST00000533408 HSD3B1P14060 373 aa20.18■□□□□ 0.82
PTP4A2-215ENST00000533408 PTX3P26022 381 aaPredicted RBP20.18■□□□□ 0.82
PTP4A2-215ENST00000533408 HSD3B2P26439 372 aa20.18■□□□□ 0.82
PTP4A2-215ENST00000533408 RBMS1P29558 406 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms