RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MKKSQ9NPJ1 570 aaPredicted RBP28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 C14orf105Q9NVL8 296 aa28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 CTNNAL1Q9UBT7 734 aa28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 C3orf18Q9UK00 162 aa28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 MAP4K5Q9Y4K4 846 aa28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 FFAR3O14843 346 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 GPR42O15529 346 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 C1QAP02745 245 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 AVPR1BP47901 424 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 SNRPNP63162 240 aaKnown RBP28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 CDKL1Q00532 357 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 SLC7A5Q01650 507 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 IGFBP7Q16270 282 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 TUBB8Q3ZCM7 444 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 LAPTM4BQ86VI4 370 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 OR11G2Q8NGC1 345 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 OR4K1Q8NGD4 311 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 TSPAN17Q96FV3 270 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 MACROD1Q9BQ69 325 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 ZNF552Q9H707 407 aaPredicted RBP28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 CAB39LQ9H9S4 337 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 OARD1Q9Y530 152 aa28.76■■■□□ 2.19
SSSCA1-207ENST00000533115 WISP3O95389 354 aaPredicted RBP28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 ALPPP05187 535 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 GP5P40197 560 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 MLLT10P55197 1068 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 TSNQ15631 228 aaKnown RBP28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 WHAMMP3Q1A5X7 153 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 ADAMTSL2Q86TH1 951 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 ASPGQ86U10 573 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 CTAGE3PQ8IX95 158 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 MFSD9Q8NBP5 474 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 SLC13A3Q8WWT9 602 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 GPR22Q99680 433 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 LRRC1Q9BTT6 524 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 SARGQ9BW04 601 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 TGIF2Q9GZN2 237 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 LRRC4CQ9HCJ2 640 aa28.75■■■□□ 2.19
SSSCA1-207ENST00000533115 ESYT3A0FGR9 886 aa28.74■■■□□ 2.19
SSSCA1-207ENST00000533115 ALOX12BO75342 701 aa28.74■■■□□ 2.19
SSSCA1-207ENST00000533115 ITGA3P26006 1051 aa28.74■■■□□ 2.19
SSSCA1-207ENST00000533115 MEF2AQ02078 507 aaPredicted RBP28.74■■■□□ 2.19
SSSCA1-207ENST00000533115 USP10Q14694 798 aaKnown RBP28.74■■■□□ 2.19
SSSCA1-207ENST00000533115 SYT16Q17RD7 645 aa28.74■■■□□ 2.19
SSSCA1-207ENST00000533115 TMEM214Q6NUQ4 689 aaKnown RBP28.74■■■□□ 2.19
SSSCA1-207ENST00000533115 RBMXL3Q8N7X1 1067 aaKnown RBP28.74■■■□□ 2.19
SSSCA1-207ENST00000533115 OR9A4Q8NGU2 314 aa28.74■■■□□ 2.19
SSSCA1-207ENST00000533115 SLC5A11Q8WWX8 675 aa28.74■■■□□ 2.19
SSSCA1-207ENST00000533115 NEIL2Q969S2 332 aa28.74■■■□□ 2.19
SSSCA1-207ENST00000533115 DERL2Q9GZP9 239 aa28.74■■■□□ 2.19
SSSCA1-207ENST00000533115 NBASA2RRP1 2371 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 H0YIG0 161 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 NSA2O95478 260 aaKnown RBP28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 ACPPP15309 386 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 EMP2P54851 167 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 CSHL1Q14406 222 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 KBTBD12Q3ZCT8 623 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 CATSPEREQ5SY80 951 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 ATG9BQ674R7 924 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 JMJD6Q6NYC1 403 aaPredicted RBP28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 FRA10AC1Q70Z53 315 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 THOC6Q86W42 341 aaKnown RBP28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 EGFL8Q99944 293 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 MESP1Q9BRJ9 268 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 MFRPQ9BY79 579 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 DYRK1BQ9Y463 629 aa28.73■■■□□ 2.19
SSSCA1-207ENST00000533115 TTLL8A6PVC2 850 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 IDSB3KWA1 339 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 IPO13O94829 963 aaKnown RBP28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 HEXBP07686 556 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 STX2P32856 288 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 HNMTP50135 292 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 MAT1AQ00266 395 aaKnown RBP28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 GRTP1Q5TC63 336 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 PRSS41Q7RTY9 318 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 ZC3H7AQ8IWR0 971 aaKnown RBP28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 TBC1D19Q8N5T2 526 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 KCT2Q8NC54 265 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 FBF1Q8TES7 1133 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 ZNF592Q92610 1267 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 MIB2Q96AX9 1013 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 TSNARE1Q96NA8 513 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 PLAAQ9Y263 795 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 SLC22A14Q9Y267 594 aa28.72■■■□□ 2.19
SSSCA1-207ENST00000533115 TRBC2A0A5B9 178 aa28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 MAP2K7O14733 419 aa28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 PHGDHO43175 533 aaKnown RBP28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 OR1F1O43749 312 aa28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 SORBS2O94875 1100 aaKnown RBP28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 SLC35G6P0C7Q6 338 aa28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 STMN1P16949 149 aa28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 SPRP35270 261 aaPredicted RBP28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 GUCY2DQ02846 1103 aa28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 IGFL3Q6UXB1 125 aa28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 PARP9Q8IXQ6 854 aa28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 SPATA6LQ8N4H0 392 aa28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 PPM1NQ8N819 430 aa28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 C8orf44Q96CB5 159 aa28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 UNKQ9C0B0 810 aaKnown RBP28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 ANKHQ9HCJ1 492 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms