RNA–Protein interactions for RNA: ENST00000533059.5

CHID1-222, Transcript of chitinase domain containing 1, human

TSL 3

Gene CHID1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHID1-222	ENST00000533059	GPRC5B	Q9NZH0	403 aa		13.19	□□□□□ -0.3
CHID1-222	ENST00000533059	CPSF2	Q9P2I0	782 aa	Known RBP	13.19	□□□□□ -0.3
CHID1-222	ENST00000533059	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
CHID1-222	ENST00000533059	NXT1	Q9UKK6	140 aa	Known RBP	13.19	□□□□□ -0.3
CHID1-222	ENST00000533059		V9GYY5	206 aa	Predicted RBP	13.19	□□□□□ -0.3
CHID1-222	ENST00000533059	TRBC2	A0A5B9	178 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	CCDC189	A1A4V9	331 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	HMX2	A2RU54	273 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	ATXN7	O15265	892 aa	Predicted RBP	13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	P2RX6	O15547	441 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	RECK	O95980	971 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	ITGAX	P20702	1163 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	SLC6A12	P48065	614 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	NFKB2	Q00653	900 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	REEP5	Q00765	189 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	IL10RA	Q13651	578 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	ISCA2	Q86U28	154 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	CENPL	Q8N0S6	344 aa	Predicted RBP	13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	KRT78	Q8N1N4	520 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	RHEBL1	Q8TAI7	183 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	APOBEC4	Q8WW27	367 aa	Known RBP	13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	TTC9	Q92623	222 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	ESAM	Q96AP7	390 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	C10orf90	Q96M02	699 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	OPTC	Q9UBM4	332 aa		13.18	□□□□□ -0.3
CHID1-222	ENST00000533059	KCNE1B	A0A087WTH5	132 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059		A0A0A6YYC8	382 aa	Predicted RBP	13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	URAD	A6NGE7	173 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	SMIM23	A6NLE4	172 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059		I3L1I5	382 aa	Predicted RBP	13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	PEX12	O00623	359 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	SMIM24	O75264	130 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	ALB	P02768	609 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	CAPN1	P07384	714 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	RBP1	P09455	135 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	C1GALT1C1L	P0DN25	315 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	ARL1	P40616	181 aa	Predicted RBP	13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	GCGR	P47871	477 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	POLE2	P56282	527 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	VSNL1	P62760	191 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	SKP1	P63208	163 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	SLBP	Q14493	270 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	XKR6	Q5GH73	641 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	PAGE2B	Q5JRK9	111 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	HIST2H2AA3	Q6FI13	130 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	ADGRD1	Q6QNK2	874 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	OVCH1	Q7RTY7	1134 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	KLHDC8A	Q8IYD2	350 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	TTL	Q8NG68	377 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	OR2Y1	Q8NGV0	311 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	SLC39A7	Q92504	469 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	CCT6B	Q92526	530 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	ISL2	Q96A47	359 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	MIEF2	Q96C03	454 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	WBP1	Q96G27	269 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	ATOH8	Q96SQ7	321 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	TXLNGY	Q9BZA5	131 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	CD244	Q9BZW8	370 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	SOX17	Q9H6I2	414 aa	Predicted RBP	13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	ANKH	Q9HCJ1	492 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	ACSS2	Q9NR19	701 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	ENAM	Q9NRM1	1142 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	XPR1	Q9UBH6	696 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	TBK1	Q9UHD2	729 aa		13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	PTBP2	Q9UKA9	531 aa	Known RBP	13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	G3BP2	Q9UN86	482 aa	Known RBP	13.17	□□□□□ -0.3
CHID1-222	ENST00000533059	ARGFX	A6NJG6	315 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059		K7EPI3	171 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	TAPBP	O15533	448 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	LCMT2	O60294	686 aa	Known RBP	13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	FURIN	P09958	794 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	FAM87A	P0C7U9	286 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	SFTPC	P11686	197 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	COL6A2	P12110	1019 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	IL1RN	P18510	177 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	VARS	P26640	1264 aa	Known RBP	13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	GGT5	P36269	586 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	IRF8	Q02556	426 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	FAM53B	Q14153	422 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	LY6D	Q14210	128 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	SSPN	Q14714	243 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	PFKFB4	Q16877	469 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	TECRL	Q5HYJ1	363 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	MFSD4B	Q5TF39	518 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	FAM69B	Q5VUD6	431 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	ATG9B	Q674R7	924 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	MRPL14	Q6P1L8	145 aa	Known RBP	13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	SHISA6	Q6ZSJ9	500 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	COX15	Q7KZN9	410 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	ABHD13	Q7L211	337 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	VN1R4	Q7Z5H5	301 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	MYLK4	Q86YV6	388 aa	Predicted RBP	13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	PRSS58	Q8IYP2	241 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	DTWD1	Q8N5C7	304 aa		13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	LSM14A	Q8ND56	463 aa	Known RBP	13.16	□□□□□ -0.3
CHID1-222	ENST00000533059	TRPV3	Q8NET8	790 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms