RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 UROSP10746 265 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 SDHBP21912 280 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 SCTRP47872 440 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 TRA2AQ13595 282 aaKnown RBP eCLIP16.9■□□□□ 0.3
CTSB-222ENST00000531551 E2F2Q14209 437 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 ZC3H12BQ5HYM0 836 aaKnown RBP16.9■□□□□ 0.3
CTSB-222ENST00000531551 FRMPD2BQ6IN97 320 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 RGS9BPQ6ZS82 235 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.9■□□□□ 0.3
CTSB-222ENST00000531551 RNF175Q8N4F7 328 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 ANKRD53Q8N9V6 530 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 SELENOMQ8WWX9 145 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 RERGQ96A58 199 aaPredicted RBP16.9■□□□□ 0.3
CTSB-222ENST00000531551 REPS1Q96D71 796 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 SLC41A2Q96JW4 573 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 MTERF1Q99551 399 aaKnown RBP16.9■□□□□ 0.3
CTSB-222ENST00000531551 FARSBQ9NSD9 589 aaKnown RBP16.9■□□□□ 0.3
CTSB-222ENST00000531551 SEMA5BQ9P283 1151 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 CLCA2Q9UQC9 943 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 UNC13CQ8NB66 2214 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 H0YIV9 168 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 SH3BGRLO75368 114 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 CSO75390 466 aaKnown RBP16.89■□□□□ 0.29
CTSB-222ENST00000531551 CHEK2O96017 543 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 KRT6AP02538 564 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 KRT6BP04259 564 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 KRT6CP48668 564 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 COL9A2Q14055 689 aaPredicted RBP16.89■□□□□ 0.29
CTSB-222ENST00000531551 C16orf72Q14CZ0 275 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 FRG2Q64ET8 278 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 RNF44Q7L0R7 432 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 MCATQ8IVS2 390 aaKnown RBP16.89■□□□□ 0.29
CTSB-222ENST00000531551 D2HGDHQ8N465 521 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 DNAJC22Q8N4W6 341 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 AFAP1L2Q8N4X5 818 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 MFSD9Q8NBP5 474 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 C7orf26Q96N11 449 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 DEPDC7Q96QD5 511 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 FRG2BQ96QU4 278 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 MACROD1Q9BQ69 325 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 SLC29A3Q9BZD2 475 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 SYNPO2LQ9H987 977 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 PILRAQ9UKJ1 303 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 BTRCQ9Y297 605 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.89■□□□□ 0.29
CTSB-222ENST00000531551 PCDHGA4Q9Y5G9 962 aa16.89■□□□□ 0.29
CTSB-222ENST00000531551 LOC105369274A0A096LPK9 316 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 LOC102723532A0A0G2JNH3 316 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 ULK1O75385 1050 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 SKAP2O75563 359 aaPredicted RBP16.88■□□□□ 0.29
CTSB-222ENST00000531551 FGF4P08620 206 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 FOLR1P15328 257 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 HTR6P50406 440 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 VSX2P58304 361 aaPredicted RBP16.88■□□□□ 0.29
CTSB-222ENST00000531551 FOXM1Q08050 763 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 GPR19Q15760 415 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 PDCD2Q16342 344 aaPredicted RBP16.88■□□□□ 0.29
CTSB-222ENST00000531551 ISXQ2M1V0 245 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 CDCP2Q5VXM1 449 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 KANK2Q63ZY3 851 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 LAS2Q8IYD9 372 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 OR4N4Q8N0Y3 316 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 HUS1BQ8NHY5 278 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 PPP1R36Q96LQ0 422 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 OR2A5Q96R48 311 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 STRADBQ9C0K7 418 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 PITHD1Q9GZP4 211 aaPredicted RBP16.88■□□□□ 0.29
CTSB-222ENST00000531551 CCDC134Q9H6E4 229 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 AKAP7Q9P0M2 348 aaPredicted RBP16.88■□□□□ 0.29
CTSB-222ENST00000531551 ZFP69BQ9UJL9 534 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 H0YGG7 62 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 MANBAO00462 879 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 NDUFS4O43181 175 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 PDYNP01213 254 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 CCKBRP32239 447 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 PLA2G5P39877 138 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 ARF3P61204 181 aaPredicted RBP16.88■□□□□ 0.29
CTSB-222ENST00000531551 ABRAXAS2Q15018 415 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 PCM1Q15154 2024 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 DDIASQ8IXT1 998 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 AGBL5Q8NDL9 886 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 WDR20Q8TBZ3 569 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 PIWIL2Q8TC59 973 aaKnown RBP16.88■□□□□ 0.29
CTSB-222ENST00000531551 TWIST2Q8WVJ9 160 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 SLC13A3Q8WWT9 602 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 NT5DC2Q9H857 520 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 STARD5Q9NSY2 213 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 OCIAD1Q9NX40 245 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 PLCL2Q9UPR0 1127 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 DNAJC15Q9Y5T4 150 aa16.88■□□□□ 0.29
CTSB-222ENST00000531551 EFCAB7A8K855 629 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 TMEM150CB9EJG8 249 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 EDF1O60869 148 aaKnown RBP16.87■□□□□ 0.29
CTSB-222ENST00000531551 DKK1O94907 266 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 CTSBP07858 339 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 LSP1P33241 339 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 PHEXP78562 749 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 FOXR1Q6PIV2 292 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 MTERF4Q7Z6M4 381 aaKnown RBP16.87■□□□□ 0.29
CTSB-222ENST00000531551 ASPGQ86U10 573 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms