RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ZNF160Q9HCG1 818 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 C14orf105Q9NVL8 296 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 MOCS1Q9NZB8 636 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 MRPS2Q9Y399 296 aaKnown RBP17.62■□□□□ 0.41
CAPN1-203ENST00000525013 SPTBN1Q01082 2364 aaKnown RBP17.62■□□□□ 0.41
CAPN1-203ENST00000525013 SPTAN1Q13813 2472 aaKnown RBP17.62■□□□□ 0.41
CAPN1-203ENST00000525013 SVILO95425 2214 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 KCNE1BA0A087WTH5 132 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 FAM95CA0A1B0GW59 222 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 RAD51CO43502 376 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 HPP00738 406 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 NPPBP16860 134 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 BCL6P41182 706 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 UQCRFS1P47985 274 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 MAT1AQ00266 395 aaKnown RBP17.61■□□□□ 0.41
CAPN1-203ENST00000525013 C2orf54Q08AI8 447 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 ZNF460Q14592 562 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 ATG9BQ674R7 924 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 SLC26A11Q86WA9 606 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 CAMKVQ8NCB2 501 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 GALNT11Q8NCW6 608 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 ATL1Q8WXF7 558 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 PDLIM5Q96HC4 596 aaKnown RBP17.61■□□□□ 0.41
CAPN1-203ENST00000525013 SAYSD1Q9NPB0 183 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 NSMCE4AQ9NXX6 385 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 WHRNQ9P202 907 aa17.61■□□□□ 0.41
CAPN1-203ENST00000525013 NSG1A0A0A6YYJ2 146 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 LCMT2O60294 686 aaKnown RBP17.6■□□□□ 0.41
CAPN1-203ENST00000525013 PIAS1O75925 651 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 ENO2P09104 434 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-203ENST00000525013 ZNF37AP17032 561 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-203ENST00000525013 GNLYP22749 145 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 CCR8P51685 355 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 EEF1A2Q05639 463 aaKnown RBP17.6■□□□□ 0.41
CAPN1-203ENST00000525013 ZXDCQ2QGD7 858 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-203ENST00000525013 TMEM207Q6UWW9 146 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 ASPGQ86U10 573 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 IQCKQ8N0W5 287 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 NKAPQ8N5F7 415 aaKnown RBP17.6■□□□□ 0.41
CAPN1-203ENST00000525013 OR56A3Q8NH54 315 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 ZCCHC10Q8TBK6 192 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 SLC13A3Q8WWT9 602 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 FBXL8Q96CD0 374 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 VPS39Q96JC1 886 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 TGIF2Q9GZN2 237 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 IKZF3Q9UKT9 509 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 MKL2Q9ULH7 1088 aa17.6■□□□□ 0.41
CAPN1-203ENST00000525013 SPENQ96T58 3664 aaKnown RBP17.6■□□□□ 0.41
CAPN1-203ENST00000525013 USP9YO00507 2555 aaPredicted RBP17.59■□□□□ 0.41
CAPN1-203ENST00000525013 HIVEP3Q5T1R4 2406 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 NPEPPSL1A6NEC2 478 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 CDC7O00311 574 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 IL1RNP18510 177 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 VARSP26640 1264 aaKnown RBP17.59■□□□□ 0.41
CAPN1-203ENST00000525013 TAS2R39P59534 338 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 ETF1P62495 437 aaKnown RBP17.59■□□□□ 0.41
CAPN1-203ENST00000525013 SNRPNP63162 240 aaKnown RBP17.59■□□□□ 0.41
CAPN1-203ENST00000525013 MEF2AQ02078 507 aaPredicted RBP17.59■□□□□ 0.41
CAPN1-203ENST00000525013 Q0VFX4 171 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 MFSD4BQ5TF39 518 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 SBSNQ6UWP8 590 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 SYT10Q6XYQ8 523 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 NDUFAF7Q7L592 441 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 PRSS41Q7RTY9 318 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 ZC3H7AQ8IWR0 971 aaKnown RBP17.59■□□□□ 0.41
CAPN1-203ENST00000525013 CISD2Q8N5K1 135 aaKnown RBP17.59■□□□□ 0.41
CAPN1-203ENST00000525013 MFSD9Q8NBP5 474 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 KCT2Q8NC54 265 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 C19orf60Q96EN9 201 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 OR4K3Q96R72 315 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 RHOJQ9H4E5 214 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 ANKHQ9HCJ1 492 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 HCN3Q9P1Z3 774 aa17.59■□□□□ 0.41
CAPN1-203ENST00000525013 H0YIG0 161 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 SGK494L7N484 410 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 OR1F1O43749 312 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 BMP10O95393 424 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 NSA2O95478 260 aaKnown RBP17.58■□□□□ 0.4
CAPN1-203ENST00000525013 SERPIND1P05546 499 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 SLC35G6P0C7Q6 338 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 COX6A1P12074 109 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 SSTR1P30872 391 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 SLC12A2P55011 1212 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 CSHL1Q14406 222 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 TMEM214Q6NUQ4 689 aaKnown RBP17.58■□□□□ 0.4
CAPN1-203ENST00000525013 LINC00696Q6ZRV3 163 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 KBTBD2Q8IY47 623 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 FAM26EQ8N5C1 309 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 TBC1D19Q8N5T2 526 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 ABHD11Q8NFV4 315 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 TM4SF19Q96DZ7 209 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 TSNARE1Q96NA8 513 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 EGFL8Q99944 293 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 WDR77Q9BQA1 342 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-203ENST00000525013 SLC29A3Q9BZD2 475 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 FAM129AQ9BZQ8 928 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 EPS8L2Q9H6S3 715 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 SMYD2Q9NRG4 433 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 TXNDC16Q9P2K2 825 aa17.58■□□□□ 0.4
CAPN1-203ENST00000525013 NOVA2Q9UNW9 492 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms