RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 MIPEPQ99797 713 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 INTS10Q9NVR2 710 aaKnown RBP11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 B3GNT3Q9Y2A9 372 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 HIVEP3Q5T1R4 2406 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 NBPF19A0A087WUL8 3843 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 A0A1W2PPM1 405 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 BLACEA4D250 179 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 OR2A25A4D2G3 310 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 E5RI56 91 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 GOLGA8TH3BQL2 631 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 PSIP1O75475 530 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 AGFG2O95081 481 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 ERGP11308 486 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 PKMP14618 531 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 PSMB5P28074 263 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 CMPK1P30085 196 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 VSX2P58304 361 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 ILF2Q12905 390 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 ARHGAP19Q14CB8 494 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 PLEKHN1Q494U1 663 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 ANKRD20A4Q4UJ75 823 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 WASHC2DQ5SRD0 308 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 GRTP1Q5TC63 336 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 NEPROQ6NW34 567 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 C6orf89Q6UWU4 347 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 SH2D5Q6ZV89 423 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 COX15Q7KZN9 410 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 RNF44Q7L0R7 432 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 CILP2Q8IUL8 1156 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 LRRC34Q8IZ02 419 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 ZADH2Q8N4Q0 377 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 OR9A1PQ8NGU1 263 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 SLC6A20Q9NP91 592 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 SEMA3GQ9NS98 782 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 MKS1Q9NXB0 559 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 NSMCE4AQ9NXX6 385 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 LUZP4Q9P127 313 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 RUVBL2Q9Y230 463 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 CRYL1Q9Y2S2 319 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 ICE1Q9Y2F5 2266 aa11.89□□□□□ -0.51
TRAPPC9-206ENST00000519482 A0A0J9YVX5 310 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 HYKKA2RU49 373 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 VSTM2BA6NLU5 285 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 ZNF839A8K0R7 811 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 TCP11X1B4DZS4 312 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 MYO1CO00159 1063 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 SOCS6O14544 535 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 USP1O94782 785 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 ITGA3P26006 1051 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 RPA3P35244 121 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 HSD17B2P37059 387 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 OR1D4P47884 311 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 EMP3P54852 163 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 WDR4P57081 412 aaKnown RBP11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 FOXL2P58012 376 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 PDK4Q16654 411 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 TTLL9Q3SXZ7 439 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 PRR30Q53SZ7 412 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 PRAMEF13Q5VWM6 474 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 FRMPD2BQ6IN97 320 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 PRMT9Q6P2P2 845 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 NEK10Q6ZWH5 1172 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 TMEM151BQ8IW70 566 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 LMNTD2Q8IXW0 634 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 FBXO15Q8NCQ5 510 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 GABPB2Q8TAK5 448 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 SMPDL3AQ92484 453 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 MRRFQ96E11 262 aaKnown RBP11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 ZFYVE21Q9BQ24 234 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 PLAC1Q9HBJ0 212 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 ZNF304Q9HCX3 659 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 CUEDC1Q9NWM3 386 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 TXNDC16Q9P2K2 825 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 KLHL42Q9P2K6 505 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 HS3ST3B1Q9Y662 390 aa11.88□□□□□ -0.51
TRAPPC9-206ENST00000519482 KRT87PA6NCN2 255 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 ARHGEF33A8MVX0 844 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 COPEO14579 308 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 SPAG7O75391 227 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 VPS26AO75436 327 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 CATP04040 527 aaKnown RBP11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 TAC1P20366 129 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 CRHR1P34998 444 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 CLCN7P51798 805 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 THOC5Q13769 683 aaKnown RBP11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 FASTKQ14296 549 aaKnown RBP11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 RBBP7Q16576 425 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 MUM1Q2TAK8 710 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 ACSBG2Q5FVE4 666 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 IRAK1BP1Q5VVH5 260 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 KIRREL2Q6UWL6 708 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 Q6ZS92 163 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 MGARPQ8TDB4 240 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 LRRC8CQ8TDW0 803 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 SSC4DQ8WTU2 575 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 FAM136AQ96C01 138 aa11.87□□□□□ -0.51
TRAPPC9-206ENST00000519482 SNRNP40Q96DI7 357 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms