RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 MTERF1Q99551 399 aaKnown RBP13.94□□□□□ -0.18
CLN8-204ENST00000519254 DPY30Q9C005 99 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 PCDHAC1Q9H158 963 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 CLMPQ9H6B4 373 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 XKR8Q9H6D3 395 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 MVB12BQ9H7P6 319 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 ZNF624Q9P2J8 865 aaPredicted RBP13.94□□□□□ -0.18
CLN8-204ENST00000519254 C15orf41Q9Y2V0 281 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 COLEC10Q9Y6Z7 277 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 R4GN57 208 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 AQP9O43315 295 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 GALR2O43603 387 aaPredicted RBP13.93□□□□□ -0.18
CLN8-204ENST00000519254 BAG2O95816 211 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 TACR1P25103 407 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 CTSKP43235 329 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 ATXN3P54252 364 aaPredicted RBP13.93□□□□□ -0.18
CLN8-204ENST00000519254 BNC1Q01954 994 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 TRAP1Q12931 704 aaKnown RBP13.93□□□□□ -0.18
CLN8-204ENST00000519254 C6orf10Q5SRN2 563 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 ATG9BQ674R7 924 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 IYDQ6PHW0 289 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 DLEU7Q6UYE1 221 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 TMPRSS11BQ86T26 416 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 GKN2Q86XP6 184 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 KIAA2013Q8IYS2 634 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 GLB1L3Q8NCI6 653 aaPredicted RBP13.93□□□□□ -0.18
CLN8-204ENST00000519254 OR7G3Q8NG95 312 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 CLHC1Q8NHS4 586 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 SETD7Q8WTS6 366 aaKnown RBP13.93□□□□□ -0.18
CLN8-204ENST00000519254 ZDHHC1Q8WTX9 485 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 TMEM125Q96AQ2 219 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 FCRL1Q96LA6 429 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 MENTQ9BUN1 341 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 TRIM8Q9BZR9 551 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 CCDC177Q9NQR7 707 aaPredicted RBP13.93□□□□□ -0.18
CLN8-204ENST00000519254 UCKL1Q9NWZ5 548 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 TMED5Q9Y3A6 229 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 DYRK1BQ9Y463 629 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 PCDHGA11Q9Y5H2 935 aa13.93□□□□□ -0.18
CLN8-204ENST00000519254 PRR33A8MZF0 331 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 PATE3B3GLJ2 98 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 PIAS2O75928 621 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 NPPAP01160 153 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 C1GALT1C1LP0DN25 315 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 PRPS2P11908 318 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 ACPPP15309 386 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 SDC1P18827 310 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 NUP214P35658 2090 aaPredicted RBP13.92□□□□□ -0.18
CLN8-204ENST00000519254 VHLP40337 213 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 SLC19A1P41440 591 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 CLDN8P56748 225 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 DDX39BQ13838 428 aaKnown RBP13.92□□□□□ -0.18
CLN8-204ENST00000519254 DEFB133Q30KQ1 61 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 THEMIS2Q5TEJ8 643 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 OR52E1Q8NGJ3 308 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 DNAJB14Q8TBM8 379 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 TMEM131Q92545 1883 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 APOLD1Q96LR9 279 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 ZBTB18Q99592 522 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 EHD1Q9H4M9 534 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 BRF2Q9HAW0 419 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 GEMIN8Q9NWZ8 242 aaKnown RBP13.92□□□□□ -0.18
CLN8-204ENST00000519254 VPS29Q9UBQ0 182 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 BCAP29Q9UHQ4 241 aa13.92□□□□□ -0.18
CLN8-204ENST00000519254 MAGEB17A8MXT2 336 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 YY2O15391 372 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 DNAJA2O60884 412 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 ETHE1O95571 254 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 VIPP01282 170 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 HSD3B1P14060 373 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 HSD17B1P14061 328 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 HSD3B2P26439 372 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 ARRB1P49407 418 aaPredicted RBP13.91□□□□□ -0.18
CLN8-204ENST00000519254 ARHGAP19Q14CB8 494 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 PLCL1Q15111 1095 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 CYP2A13Q16696 494 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 FAM174BQ3ZCQ3 159 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 RABL3Q5HYI8 236 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 SPANXN4Q5MJ08 99 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 NANOGP8Q6NSW7 305 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 NOXRED1Q6NXP6 359 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 NXPE4Q6UWF7 544 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 DHDDSQ86SQ9 333 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 NAGSQ8N159 534 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 RAB42Q8N4Z0 105 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 HUS1BQ8NHY5 278 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 SLC37A2Q8TED4 501 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 SLC5A11Q8WWX8 675 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 C11orf24Q96F05 449 aaPredicted RBP13.91□□□□□ -0.18
CLN8-204ENST00000519254 ELF4Q99607 663 aaPredicted RBP13.91□□□□□ -0.18
CLN8-204ENST00000519254 NANOGQ9H9S0 305 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 LRRC42Q9Y546 428 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 SNRNP200O75643 2136 aaKnown RBP13.91□□□□□ -0.18
CLN8-204ENST00000519254 IL6P05231 212 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 ANXA6P08133 673 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 PCNAP12004 261 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 NDUFS1P28331 727 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 MAPK1P28482 360 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 PHC1P78364 1004 aa13.91□□□□□ -0.18
CLN8-204ENST00000519254 MRPS22P82650 360 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms