RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	DNAJC22	Q8N4W6	341 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	KLHDC1	Q8N7A1	406 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	LMNTD1	Q8N9Z9	388 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SMYD1	Q8NB12	490 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CLEC18C	Q8NCF0	446 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	OR52N5	Q8NH56	324 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	LNX1	Q8TBB1	728 aa	Predicted RBP	4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PHF21B	Q96EK2	531 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NSL1	Q96IY1	281 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PRMT1	Q99873	361 aa	Known RBP	4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NTPCR	Q9BSD7	190 aa	Known RBP	4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZNF577	Q9BSK1	485 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MTMR12	Q9C0I1	747 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	LAT2	Q9GZY6	243 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	DPH5	Q9H2P9	285 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	LRRC4	Q9HBW1	653 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SLC12A6	Q9UHW9	1150 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	DNPEP	Q9ULA0	475 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MACROD2	A1Z1Q3	448 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SLC15A5	A6NIM6	579 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006		E5RGE8	158 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CCL24	O00175	119 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TEX28	O15482	410 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	XPNPEP2	O43895	674 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PDGFB	P01127	241 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MMP10	P09238	476 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SKIL	P12757	684 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	F3	P13726	295 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CA4	P22748	312 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ALDH1B1	P30837	517 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CHRNA3	P32297	505 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NR0B1	P51843	470 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CNN1	P51911	297 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MAZ	P56270	477 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PITX1	P78337	314 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GCNT1	Q02742	428 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	LGALS3BP	Q08380	585 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GAGE5	Q13069	117 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GAGE6	Q13070	117 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	OPCML	Q14982	345 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	KARS	Q15046	597 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TAF1B	Q53T94	588 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ARMCX4	Q5H9R4	360 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	DCAF10	Q5QP82	559 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZNF549	Q6P9A3	640 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	DLEU7	Q6UYE1	221 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	KCTD8	Q6ZWB6	473 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PRUNE1	Q86TP1	453 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TDH	Q8IZJ6	230 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PELI3	Q8N2H9	469 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NTN5	Q8WTR8	489 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SLCO4A1	Q96BD0	722 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ULK4	Q96C45	1275 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	LGALS12	Q96DT0	336 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MRPL38	Q96DV4	380 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	LRRC1	Q9BTT6	524 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MRI	Q9BWK5	157 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	EBF2	Q9HAK2	575 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NGB	Q9NPG2	151 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PIGV	Q9NUD9	493 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CACNA1I	Q9P0X4	2223 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NUDC	Q9Y266	331 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NSG2	Q9Y328	171 aa		4.59	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FAM205A	Q6ZU69	1335 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	IGHV4OR15-8	A0A075B7B6	117 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	IGLV5-45	A0A087WSX0	123 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	LOC101059948	A0A1B0GTJ6	334 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006		M0R296	226 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SLC28A1	O00337	649 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PSMD3	O43242	534 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	GMNN	O75496	209 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	GRAP2	O75791	330 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	OR6B1	O95007	311 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PTBP3	O95758	552 aa	Known RBP	4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	IGHV4-39	P01824	125 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PGK2	P07205	417 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ACAA1	P09110	424 aa	Predicted RBP	4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SCP2	P22307	547 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	OR3A3	P47888	321 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	FMO5	P49326	533 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SLC26A5	P58743	744 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	B3GALT5-AS1	P59052	145 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	RPP38	P78345	283 aa	Known RBP	4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TAF13	Q15543	124 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	FASTKD1	Q53R41	847 aa	Known RBP	4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ZNF542P	Q5EBM4	170 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PDSS1	Q5T2R2	415 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PRAMEF7	Q5VXH5	474 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	C11orf87	Q6NUJ2	197 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CD164L2	Q6UWJ8	174 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	MACC1	Q6ZN28	852 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CCDC60	Q8IWA6	550 aa	Predicted RBP	4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	FBXW8	Q8N3Y1	598 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	MAPKAPK5-AS1	Q8N8E1	139 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	LEMD2	Q8NC56	503 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	OR4A16	Q8NH70	328 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ELP5	Q8TE02	316 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms