RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 TMEM207Q6UWW9 146 aa12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 LANCL3Q6ZV70 420 aa12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 PRSS41Q7RTY9 318 aa12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 PIWIL4Q7Z3Z4 852 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 VN1R4Q7Z5H5 301 aa12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 CPEB2Q7Z5Q1 589 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 CPNE9Q8IYJ1 553 aa12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 MCUQ8NE86 351 aa12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 OR51Q1Q8NH59 317 aa12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 DNAJB8Q8NHS0 232 aa12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 CD200R1Q8TD46 325 aa12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 MAGOHBQ96A72 148 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 RNF32Q9H0A6 362 aa12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 C20orf96Q9NUD7 363 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 ABI3Q9P2A4 366 aa12.66□□□□□ -0.38
POLR2J3-217ENST00000513438 KCNE1BA0A087WTH5 132 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 TRGV8A0A0C4DH27 118 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 LCMT2O60294 686 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 PRAMEF2O60811 474 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 WISP2O76076 250 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 SEC24DO94855 1032 aaPredicted RBP12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 NSA2O95478 260 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 CRYABP02511 175 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 MYBL2P10244 700 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 PRF1P14222 555 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 POU3F2P20265 443 aaPredicted RBP12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 HRH2P25021 359 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 SLC1A2P43004 574 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 RPS15AP62244 130 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 CSNK1G2P78368 415 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 LONRF1Q17RB8 773 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 BTBD16Q32M84 506 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 MINDY4Q4G0A6 757 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 MCEMP1Q8IX19 187 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 LMNTD2Q8IXW0 634 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 MCOLN3Q8TDD5 553 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 TM4SF19Q96DZ7 209 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 SIGLEC10Q96LC7 697 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 SERPINB12Q96P63 405 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 UNKQ9C0B0 810 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 XAB2Q9HCS7 855 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 CCDC177Q9NQR7 707 aaPredicted RBP12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 HCN3Q9P1Z3 774 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 SEC14L3Q9UDX4 400 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 TEKT2Q9UIF3 430 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 FBXO5Q9UKT4 447 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 MAD1L1Q9Y6D9 718 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 COMMD10Q9Y6G5 202 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 CPAMD8Q8IZJ3 1885 aa12.65□□□□□ -0.38
POLR2J3-217ENST00000513438 ABCA12Q86UK0 2595 aa12.65□□□□□ -0.39
POLR2J3-217ENST00000513438 FEZF1A0PJY2 475 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 SGK494L7N484 410 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 CCL21O00585 134 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 IL1RNP18510 177 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 COILP38432 576 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 BCL6P41182 706 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 XCR1P46094 333 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 TBPL1P62380 186 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 MPP1Q00013 466 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 PTK6Q13882 451 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 HSP90AA5PQ58FG0 334 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 FCRLBQ6BAA4 426 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 TMEM214Q6NUQ4 689 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 ANKRD37Q7Z713 158 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 SLC26A11Q86WA9 606 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 AGGF1Q8N302 714 aaeCLIP12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 KCT2Q8NC54 265 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 CAMKVQ8NCB2 501 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 CALML6Q8TD86 181 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 EEF1AKMT1Q8WVE0 214 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 ITLN2Q8WWU7 325 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 ALKBH8Q96BT7 664 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 THAP11Q96EK4 314 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 MS4A14Q96JA4 679 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 ZNF354BQ96LW1 612 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 CCDC138Q96M89 665 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 AARSD1Q9BTE6 412 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 ATG10Q9H0Y0 220 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 IARS2Q9NSE4 1012 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 C19orf25Q9UFG5 118 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 ADAMTS6Q9UKP5 1117 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 SH2B3Q9UQQ2 575 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 PDE10AQ9Y233 779 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 CSMD1Q96PZ7 3565 aa12.64□□□□□ -0.39
POLR2J3-217ENST00000513438 EIF3FO00303 357 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 CYC1P08574 325 aa12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 GRNP28799 593 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 MAGEA3P43357 314 aa12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 ST13P50502 369 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 TIAL1Q01085 375 aaKnown RBP eCLIP12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 PMP22Q01453 160 aa12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 ART3Q13508 389 aa12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 NAE1Q13564 534 aa12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 ZNF766Q5HY98 468 aa12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 ACER2Q5QJU3 275 aa12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 PLAG1Q6DJT9 500 aa12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 UGT3A1Q6NUS8 523 aa12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 H3F3CQ6NXT2 135 aa12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 CCDC137Q6PK04 289 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-217ENST00000513438 AGTRAPQ6RW13 159 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms