RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 MAGEA2P43356 314 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 BLKP51451 505 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 STC1P52823 247 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 DNAJB13P59910 316 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 SCGB2B2Q4G0G5 96 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 NPAS3Q8IXF0 933 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 YIPF7Q8N8F6 280 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 DBF4BQ8NFT6 615 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 OR2AP1Q8NGE2 309 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 SEC14L1Q92503 715 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 SUSD3Q96L08 255 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 SIGLEC10Q96LC7 697 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 TUBA1CQ9BQE3 449 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 FXYD6Q9H0Q3 95 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 CCSER2Q9H7U1 834 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 TAC3Q9UHF0 121 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 FBXO9Q9UK97 447 aaPredicted RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 ZNF670-ZNF695F2Z2N8 137 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 J3QLW9 94 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 L7N2F9 121 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 CCRL2O00421 344 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 RPP14O95059 124 aaKnown RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 JUNP05412 331 aaKnown RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 ZNF19P17023 458 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 VIPR1P32241 457 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 GDF5P43026 501 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 MLLT6P55198 1093 aaPredicted RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 VAMP2P63027 116 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 PRKCDQ05655 676 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 ZNF33AQ06730 810 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 OLIG2Q13516 323 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 ZNF678Q5SXM1 525 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 AMIGO1Q86WK6 493 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 ZNF420Q8TAQ5 688 aaPredicted RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 KCNA7Q96RP8 456 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 IRF2BPLQ9H1B7 796 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 CENPMQ9NSP4 180 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 ISPDA4D126 451 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 NRP1O14786 923 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 CLDN7O95471 211 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 DLDP09622 509 aaKnown RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 EIF2S3P41091 472 aaKnown RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 MAGEA12P43365 314 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 NRG3P56975 720 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 SEMA3AQ14563 771 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 PCBP2Q15366 365 aaKnown RBP eCLIP10.29□□□□□ -0.76
NEK1-206ENST00000510533 EIF5AL1Q6IS14 154 aaKnown RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 RELL1Q8IUW5 271 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 C2CD4AQ8NCU7 369 aaPredicted RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 OR10Q1Q8NGQ4 319 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 SMPDL3AQ92484 453 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 METTL8Q9H825 291 aaKnown RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 CARS2Q9HA77 564 aaKnown RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 ERVK-11Q9UQG0 969 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 WDR37Q9Y2I8 494 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 PCDHGB6Q9Y5F9 930 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 CH25HO95992 272 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 IFNA21P01568 189 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 RPP38P78345 283 aaKnown RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 NCEH1Q6PIU2 408 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 LRRTM4Q86VH4 590 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 SNX29P2Q8IUI4 249 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 FAM46DQ8NEK8 389 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 OR52E4Q8NGH9 312 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 THAP6Q8TBB0 222 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 BPIFB1Q8TDL5 484 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 SMPDL3BQ92485 455 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 GAL3ST3Q96A11 431 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 WACQ9BTA9 647 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 RNF11Q9Y3C5 154 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 KCTD3Q9Y597 815 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 PRSS51A0A1B0GVH4 220 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 A0A1W2PRU2 124 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 ZNF726A6NNF4 738 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 CDC40O60508 579 aaKnown RBP eCLIP10.28□□□□□ -0.76
NEK1-206ENST00000510533 ZNF8P17098 575 aaPredicted RBP10.28□□□□□ -0.76
NEK1-206ENST00000510533 BMP8BP34820 402 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 ACADVLP49748 655 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 DGKEP52429 567 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 ARSFP54793 590 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 PON3Q15166 354 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 PTCHD3Q3KNS1 767 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 CYBRD1Q53TN4 286 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 SPRYD7Q5W111 196 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 RPS27LQ71UM5 84 aaKnown RBP10.28□□□□□ -0.76
NEK1-206ENST00000510533 BMP8AQ7Z5Y6 402 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 CEP97Q8IW35 865 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 PQLC3Q8N755 202 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 ANKFN1Q8N957 763 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 CAMKVQ8NCB2 501 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 ZNF431Q8TF32 576 aaPredicted RBP10.28□□□□□ -0.76
NEK1-206ENST00000510533 C17orf50Q8WW18 174 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 TM9SF2Q99805 663 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 SERINC1Q9NRX5 453 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 CLCA3PQ9Y6N3 262 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 I3L521 148 aa10.28□□□□□ -0.76
NEK1-206ENST00000510533 FGF3P11487 239 aaPredicted RBP10.28□□□□□ -0.76
NEK1-206ENST00000510533 RPS3AP61247 264 aaKnown RBP10.28□□□□□ -0.76
NEK1-206ENST00000510533 BTN3A2P78410 334 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms