RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 KRT5P13647 590 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 PDGFRAP16234 1089 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 UGT1A4P22310 534 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 EDNRAP25101 427 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 HNF4AP41235 474 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 CRKLP46109 303 aaKnown RBP2.43□□□□□ -2.02
GYPB-207ENST00000506679 DCDC1P59894 354 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 SULT2A1Q06520 285 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 SGCGQ13326 291 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 CDH18Q13634 790 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 TMEM132DQ14C87 1099 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 FASTKD1Q53R41 847 aaKnown RBP2.43□□□□□ -2.02
GYPB-207ENST00000506679 LRRC73Q5JTD7 316 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 SHEQ5VZ18 495 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 OR4C11Q6IEV9 310 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 FBXL22Q6P050 247 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 PRSS55Q6UWB4 352 aaPredicted RBP2.43□□□□□ -2.02
GYPB-207ENST00000506679 METTL7BQ6UX53 244 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 KIF6Q6ZMV9 814 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 FRRS1Q6ZNA5 592 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 TMEM182Q6ZP80 229 aaPredicted RBP2.43□□□□□ -2.02
GYPB-207ENST00000506679 SLC24A5Q71RS6 500 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 SPATA19Q7Z5L4 167 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 LRRTM1Q86UE6 522 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 OR5T2Q8NGG2 359 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 HEXDCQ8WVB3 486 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 C18orf12Q96KH6 178 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 ZMAT2Q96NC0 199 aaKnown RBP2.43□□□□□ -2.02
GYPB-207ENST00000506679 TRIM15Q9C019 465 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 DNAI2Q9GZS0 605 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 NYXQ9GZU5 481 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 MED20Q9H944 212 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 IARS2Q9NSE4 1012 aaKnown RBP2.43□□□□□ -2.02
GYPB-207ENST00000506679 TBC1D13Q9NVG8 400 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 PKD2L2Q9NZM6 624 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 FBXL4Q9UKA2 621 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 WIPI2Q9Y4P8 454 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 KLK4Q9Y5K2 254 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 CSNK1G3Q9Y6M4 447 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 NOTCH3Q9UM47 2321 aa2.43□□□□□ -2.02
GYPB-207ENST00000506679 LOC105371242A0A075B767 164 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 SOCS3O14543 225 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 FLRT2O43155 660 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 TLX2O43763 284 aaPredicted RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 SAP30O75446 220 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 PGLSO95336 258 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 HSPA4LO95757 839 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 C9P02748 559 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 TRIM49P0CI25 452 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 TRIM49CP0CI26 452 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 SCG2P13521 617 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 PRKACGP22612 351 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 PSMB4P28070 264 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 RBMS1P29558 406 aaKnown RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 HOXC13P31276 330 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 SFTPDP35247 375 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 CETN2P41208 172 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 TSFMP43897 325 aaKnown RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 CAPZA1P52907 286 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 CLDN17P56750 224 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 FASTKD3Q14CZ7 662 aaKnown RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 PSMD6Q15008 389 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 NECTIN1Q15223 517 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 TWISTNBQ3B726 338 aaPredicted RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 GLIPR1L2Q4G1C9 344 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 C2CD6Q53TS8 623 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 FAM133BQ5BKY9 247 aaKnown RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 SPOUT1Q5T280 376 aaKnown RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 ZNF770Q6IQ21 691 aaPredicted RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 CYB5D1Q6P9G0 228 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 DCLRE1AQ6PJP8 1040 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 METTL23Q86XA0 190 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 PRSS35Q8N3Z0 413 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 GBP7Q8N8V2 638 aaPredicted RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 NCOA7Q8NI08 942 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 C11orf45Q8TAV5 145 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 ST6GALNAC6Q969X2 333 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 FAM162AQ96A26 154 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 RBM41Q96IZ5 413 aaKnown RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 LURAP1Q96LR2 239 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 PRICKLE1Q96MT3 831 aaPredicted RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 ATOH8Q96SQ7 321 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 INTS14Q96SY0 518 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 VGLL1Q99990 258 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 TRIM51Q9BSJ1 452 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 CABLES2Q9BTV7 478 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 DGCR6LQ9BY27 220 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 SNX25Q9H3E2 840 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 RIMS4Q9H426 269 aaPredicted RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 MTHFD2LQ9H903 347 aaPredicted RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 ZCCHC17Q9NP64 241 aaKnown RBP2.42□□□□□ -2.02
GYPB-207ENST00000506679 SPHK2Q9NRA0 654 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 NDE1Q9NXR1 346 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 PAK5Q9P286 719 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 SELENOKQ9Y6D0 94 aa2.42□□□□□ -2.02
GYPB-207ENST00000506679 SPATA31D1Q6ZQQ2 1576 aa2.41□□□□□ -2.02
GYPB-207ENST00000506679 IGHV3OR16-10A0A075B7F0 116 aa2.41□□□□□ -2.02
GYPB-207ENST00000506679 A0A1W2PPR1 153 aa2.41□□□□□ -2.02
GYPB-207ENST00000506679 SHISA7A6NL88 538 aa2.41□□□□□ -2.02
GYPB-207ENST00000506679 CYSRT1A8MQ03 144 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms