RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SYPP08247 313 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 RPS3P23396 243 aaKnown RBP eCLIP7.38□□□□□ -1.232e-6■■■□□ 17.8
NEDD9-208ENST00000504387 ACVR2AP27037 513 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 APEX1P27695 318 aaKnown RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 RPL34P49207 117 aaKnown RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 MAPK12P53778 367 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 RAB8AP61006 207 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 RUNX1T1Q06455 604 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 GPR50Q13585 617 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 EFR3AQ14156 821 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 C10orf62Q5T681 223 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CAPN13Q6MZZ7 669 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 EIF3MQ7L2H7 374 aaKnown RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CDH24Q86UP0 819 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 GPR156Q8NFN8 814 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 NLGN4YQ8NFZ3 816 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CD200R1Q8TD46 325 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 POF1BQ8WVV4 589 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 BRI3BPQ8WY22 251 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 SLC7A6Q92536 515 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 FBXO32Q969P5 355 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 MCCC1Q96RQ3 725 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 MTERF1Q99551 399 aaKnown RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CTPS2Q9NRF8 586 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 A0A0B4J293 547 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 SMIM35A0A1B0GVV1 85 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 TNFRSF11BO00300 401 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 BTN3A3O00478 584 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 GABRDO14764 452 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 FPGTO14772 594 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 WISP3O95389 354 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 JUNDP17535 347 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 POLR2EP19388 210 aaKnown RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PTNP21246 168 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 FPR1P21462 350 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 SSTR2P30874 369 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 GKP32189 559 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 KDELR2P33947 212 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 CRYBB1P53674 252 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 RPS14P62263 151 aaKnown RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 TUBA1BP68363 451 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 HNRNPA0Q13151 305 aaKnown RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 LRRC32Q14392 662 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PROX2Q3B8N5 592 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 INO80DQ53TQ3 878 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 CTSL3PQ5NE16 218 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 C22orf42Q6IC83 251 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 ASB18Q6ZVZ8 466 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 TUBA1AQ71U36 451 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 SHFQ7M4L6 423 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 SCD5Q86SK9 330 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 OR5AK3PQ8NH89 298 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 GRPEL2Q8TAA5 225 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 LKAAEAR1Q8TD35 194 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 BRSK1Q8TDC3 778 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 MYDGFQ969H8 173 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 RNF31Q96EP0 1072 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 APIPQ96GX9 242 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 POLR1EQ9GZS1 481 aaKnown RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 MKRN2Q9H000 416 aaKnown RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 GALNT9Q9HCQ5 603 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 DYRK4Q9NR20 520 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 MCUBQ9NWR8 336 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF224Q9NZL3 707 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 SH3BP4Q9P0V3 963 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 SLC23A1Q9UHI7 598 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 FBXO9Q9UK97 447 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PPT2Q9UMR5 302 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 SATB2Q9UPW6 733 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 NUMA1Q14980 2115 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 A0A1W2PQL4 384 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 CLCA1A8K7I4 914 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 FAM25AB3EWG3 89 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 FAM25CB3EWG5 89 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 FAM25GB3EWG6 89 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 NCR1O76036 304 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 TOXO94900 526 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 TSPAN12O95859 305 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PDYNP01213 254 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 UBL4AP11441 157 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PTGS2P35354 604 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 CRATP43155 626 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 MAN2A2P49641 1150 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 MLLT6P55198 1093 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 DSC3Q14574 896 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 TAF1CQ15572 869 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 TATDN3Q17R31 274 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 FAM205BPQ63HN1 556 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PLET1Q6UQ28 207 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 ALKAL1Q6UXT8 129 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PTCHD4Q6ZW05 846 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 DNAJC22Q8N4W6 341 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 SPERTQ8NA61 448 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 SLC43A3Q8NBI5 491 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 ATP6V1C2Q8NEY4 427 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 LRRC20Q8TCA0 184 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PDLIM5Q96HC4 596 aaKnown RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 MED30Q96HR3 178 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 FRMD6Q96NE9 622 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 TM6SF2Q9BZW4 377 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms