RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CCDC115Q96NT0 180 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 EFHD1Q9BUP0 239 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 THUMPD3Q9BV44 507 aaKnown RBP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 PCBD2Q9H0N5 130 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 SEMA6AQ9H2E6 1030 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 PELI2Q9HAT8 420 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 SLC2A4RGQ9NR83 387 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 SCHIP1Q9P0W5 487 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 USP36Q9P275 1121 aaKnown RBP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 PRAMEF33A0A0G2JMD5 474 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 GABRR3A8MPY1 467 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 SAP18O00422 153 aaKnown RBP15.88■□□□□ 0.13
ATG4B-225ENST00000494465 FPGTO14772 594 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 SNRNP200O75643 2136 aaKnown RBP15.88■□□□□ 0.13
ATG4B-225ENST00000494465 GPIP06744 558 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 LAMP1P11279 417 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 PIM1P11309 404 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-225ENST00000494465 COX7A2P14406 83 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 GGT1P19440 569 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 HNRNPA2B1P22626 353 aaKnown RBP15.88■□□□□ 0.13
ATG4B-225ENST00000494465 ASMTP46597 345 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 GZMMP51124 257 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 HKDC1Q2TB90 917 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 GLYATQ6IB77 296 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 ANKRD26P1Q6NSI1 321 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 ERMP1Q7Z2K6 904 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 CAMKMTQ7Z624 323 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 CALHM3Q86XJ0 350 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 PHACTR4Q8IZ21 702 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 OR4K1Q8NGD4 311 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 WDR48Q8TAF3 677 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 HMGB4Q8WW32 186 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 OR2M4Q96R27 311 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 RHBGQ9H310 441 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 XKR8Q9H6D3 395 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 MAGEL2Q9UJ55 1249 aa15.88■□□□□ 0.13
ATG4B-225ENST00000494465 NDRG2Q9UN36 371 aaKnown RBP15.88■□□□□ 0.13
ATG4B-225ENST00000494465 SRFP11831 508 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 PSMA4P25789 261 aaKnown RBP15.87■□□□□ 0.13
ATG4B-225ENST00000494465 PKLRP30613 574 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 RAB28P51157 221 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 RPE65Q16518 533 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 CYP51A1Q16850 503 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 MTX3Q5HYI7 312 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 ENPP7Q6UWV6 458 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 GCNT7Q6ZNI0 430 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 AMIGO2Q86SJ2 522 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 KRT78Q8N1N4 520 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 METTL4Q8N3J2 472 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 ANKRD53Q8N9V6 530 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 OR2T12Q8NG77 320 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 CDC26Q8NHZ8 85 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 BIRC7Q96CA5 298 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 SH3GL1Q99961 368 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 AURKCQ9UQB9 309 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 LRRC72A6NJI9 287 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 PDZK1P1A8MUH7 402 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 RFXANKO14593 260 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 C1QCP02747 245 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 CCDC85BQ15834 202 aaPredicted RBP15.87■□□□□ 0.13
ATG4B-225ENST00000494465 DUOXA1Q1HG43 343 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 TBCELQ5QJ74 424 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 TMEM132CQ8N3T6 1108 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 PAPD5Q8NDF8 572 aaKnown RBP15.87■□□□□ 0.13
ATG4B-225ENST00000494465 CATSPER1Q8NEC5 780 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 FLCNQ8NFG4 579 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 NELL1Q92832 810 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 SH3KBP1Q96B97 665 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 FAM120CQ9NX05 1096 aaKnown RBP15.87■□□□□ 0.13
ATG4B-225ENST00000494465 ICKQ9UPZ9 632 aa15.87■□□□□ 0.13
ATG4B-225ENST00000494465 IGKV1-8A0A0C4DH67 115 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 GNG14A0A1W2PPG7 69 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 EML2O95834 649 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 GBAP04062 536 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 ZNF26P17031 533 aaPredicted RBP15.86■□□□□ 0.13
ATG4B-225ENST00000494465 TRPC1P48995 793 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 CCR8P51685 355 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 REEP5Q00765 189 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 ZNF763Q0D2J5 394 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 SLC14A1Q13336 389 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 RBBP5Q15291 538 aaKnown RBP15.86■□□□□ 0.13
ATG4B-225ENST00000494465 ZNF551Q7Z340 670 aaPredicted RBP15.86■□□□□ 0.13
ATG4B-225ENST00000494465 ZNF687Q8N1G0 1237 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 TRPV3Q8NET8 790 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 OR52E1Q8NGJ3 308 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 OR2A1Q8NGT9 310 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 OR2L8Q8NGY9 312 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 STARD8Q92502 1023 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 COQ8BQ96D53 544 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 WDR92Q96MX6 357 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 GBP5Q96PP8 586 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 GAS2L1Q99501 681 aaPredicted RBP15.86■□□□□ 0.13
ATG4B-225ENST00000494465 MVB12BQ9H7P6 319 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 TBC1D29Q9UFV1 150 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 H7BY64 318 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 HNRNPRO43390 633 aaKnown RBP15.86■□□□□ 0.13
ATG4B-225ENST00000494465 APBB3O95704 486 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 UMPSP11172 480 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 BMP2P12643 396 aa15.86■□□□□ 0.13
ATG4B-225ENST00000494465 UQCRBP14927 111 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms