RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TGIF2Q9GZN2 237 aa12.71□□□□□ -0.37
CTDSP1-212ENST00000494067 PPANQ9NQ55 473 aaKnown RBP12.71□□□□□ -0.37
CTDSP1-212ENST00000494067 PTGFRNQ9P2B2 879 aa12.71□□□□□ -0.37
CTDSP1-212ENST00000494067 C19orf25Q9UFG5 118 aaPredicted RBP12.71□□□□□ -0.37
CTDSP1-212ENST00000494067 MKL2Q9ULH7 1088 aa12.71□□□□□ -0.37
CTDSP1-212ENST00000494067 H0YIG0 161 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 SLC16A5O15375 505 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 KLHL18O94889 574 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 BMP10O95393 424 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 SERPINA7P05543 415 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 COX6A1P12074 109 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 PER3P56645 1201 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 EEF1A2Q05639 463 aaKnown RBP12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 SP140Q13342 867 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 PDAP1Q13442 181 aaKnown RBP12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 KIAA0408Q6ZU52 694 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 C17orf64Q86WR6 236 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 CNTN4Q8IWV2 1026 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 TBC1D19Q8N5T2 526 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 GRHL3Q8TE85 626 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 ALKBH8Q96BT7 664 aaKnown RBP12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 CAPZA3Q96KX2 299 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 OLFM1Q99784 485 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 PARVBQ9HBI1 364 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 TEKT2Q9UIF3 430 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 PYCARDQ9ULZ3 195 aa12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 USP9YO00507 2555 aaPredicted RBP12.7□□□□□ -0.38
CTDSP1-212ENST00000494067 PRRC2CQ9Y520 2896 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 IGHV1-45A0A0A0MS14 117 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 A1L4Q6 167 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 CTAGE15A4D2H0 777 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 OR2W5A6NFC9 320 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 LCMT2O60294 686 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 JRKO75564 520 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 CYC1P08574 325 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 PRR35P0CG20 571 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 C8orf89P0DMQ9 161 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 EDN3P14138 238 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 TCP1P17987 556 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 ELK3P41970 407 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 IL2P60568 153 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 MRPS25P82663 173 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 FASTKD3Q14CZ7 662 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 BBS9Q3SYG4 887 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 TEDDM1Q5T9Z0 273 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 ABHD17BQ5VST6 288 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 RPUSD3Q6P087 351 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 AGTRAPQ6RW13 159 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 MAMDC2Q7Z304 686 aaPredicted RBP12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 CTAGE6Q86UF2 777 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 ZC3H7AQ8IWR0 971 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 KLHL7Q8IXQ5 586 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 PDIK1LQ8N165 341 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 BCORP1Q8N888 145 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 OR1N1Q8NGS0 311 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 FAR1Q8WVX9 515 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 PSMF1Q92530 271 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 CERS2Q96G23 380 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 MAGEB10Q96LZ2 347 aaPredicted RBP12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 RUNDC3BQ96NL0 473 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 BARD1Q99728 777 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 HAUS8Q9BT25 410 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 TUBB6Q9BUF5 446 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.69□□□□□ -0.383e-11■■■■□ 21.4
CTDSP1-212ENST00000494067 ATG10Q9H0Y0 220 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 ANKHQ9HCJ1 492 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 CHMP2BQ9UQN3 213 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 PSAT1Q9Y617 370 aa12.69□□□□□ -0.38
CTDSP1-212ENST00000494067 SCN3AQ9NY46 2000 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 KCNE1BA0A087WTH5 132 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 TRAV17A0A0B4J275 112 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 A0A1W2PQ72 361 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 FEZF1A0PJY2 475 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 NSA2O95478 260 aaKnown RBP12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 SLC35G6P0C7Q6 338 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 BCL6P41182 706 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 SKP1P63208 163 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 CSNK1G2P78368 415 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 MINDY4Q4G0A6 757 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 STEAP4Q687X5 459 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 CAPN13Q6MZZ7 669 aaPredicted RBP12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 HIBCHQ6NVY1 386 aaPredicted RBP12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 LCTLQ6UWM7 567 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 TMEM207Q6UWW9 146 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 SYDE1Q6ZW31 735 aaPredicted RBP12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 SIRT6Q8N6T7 355 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 CATSPER1Q8NEC5 780 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 OR9A4Q8NGU2 314 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 BRIX1Q8TDN6 353 aaKnown RBP12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 ATL1Q8WXF7 558 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 HAS2Q92819 552 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 LINGO1Q96FE5 620 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 CFAP36Q96G28 342 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 OR4K3Q96R72 315 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 ZNF700Q9H0M5 742 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 SPNS1Q9H2V7 528 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 OLAHQ9NV23 265 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 ARL15Q9NXU5 204 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 ERRFI1Q9UJM3 462 aaPredicted RBP12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 CORO1CQ9ULV4 474 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms