RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ANKMY1Q9P2S6 941 aa16.47■□□□□ 0.23
LIME1-208ENST00000493265 GCN1Q92616 2671 aaKnown RBP16.46■□□□□ 0.23
LIME1-208ENST00000493265 COL27A1Q8IZC6 1860 aaPredicted RBP16.46■□□□□ 0.23
LIME1-208ENST00000493265 EFCAB7A8K855 629 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 TMEM114B3SHH9 223 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 POLR3GO15318 223 aaPredicted RBP16.46■□□□□ 0.23
LIME1-208ENST00000493265 HCRTR1O43613 425 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 LCMT2O60294 686 aaKnown RBP16.46■□□□□ 0.23
LIME1-208ENST00000493265 WFS1O76024 890 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 EIF2S1P05198 315 aaKnown RBP16.46■□□□□ 0.23
LIME1-208ENST00000493265 HGFP14210 728 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 EZRP15311 586 aaKnown RBP16.46■□□□□ 0.23
LIME1-208ENST00000493265 FOLR1P15328 257 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 CXCR2P25025 360 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 GRK2P25098 689 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 CCKBRP32239 447 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 BCL6P41182 706 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 SLC1A6P48664 564 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 GYS2P54840 703 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 NAA20P61599 178 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 CYP4F2P78329 520 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 REEP5Q00765 189 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 GUCY1A3Q02108 690 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 FOXM1Q08050 763 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 TARDBPQ13148 414 aaKnown RBP eCLIP16.46■□□□□ 0.23
LIME1-208ENST00000493265 DDX39BQ13838 428 aaKnown RBP16.46■□□□□ 0.23
LIME1-208ENST00000493265 SGO1Q5FBB7 561 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 PAGE2BQ5JRK9 111 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 ATG16L1Q676U5 607 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 FRMPD2BQ6IN97 320 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 GRHL2Q6ISB3 625 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 FBXO42Q6P3S6 717 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 CUZD1Q86UP6 607 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 KMT5CQ86Y97 462 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 MCATQ8IVS2 390 aaKnown RBP16.46■□□□□ 0.23
LIME1-208ENST00000493265 TBC1D19Q8N5T2 526 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 AGBL5Q8NDL9 886 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 OR4K1Q8NGD4 311 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 AGAP11Q8TF27 550 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 MTFMTQ96DP5 389 aaKnown RBP16.46■□□□□ 0.23
LIME1-208ENST00000493265 CRELD1Q96HD1 420 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 BBC3Q96PG8 261 aaPredicted RBP16.46■□□□□ 0.23
LIME1-208ENST00000493265 ZFYVE21Q9BQ24 234 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 NTMT1Q9BV86 223 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 EML4Q9HC35 981 aaKnown RBP16.46■□□□□ 0.23
LIME1-208ENST00000493265 OCIAD1Q9NX40 245 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 AKAP7Q9P0M2 348 aaPredicted RBP16.46■□□□□ 0.23
LIME1-208ENST00000493265 SEMA5BQ9P283 1151 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 ZNF225Q9UK10 706 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 BTRCQ9Y297 605 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 STK38LQ9Y2H1 464 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 TIMM22Q9Y584 194 aa16.46■□□□□ 0.23
LIME1-208ENST00000493265 LOC105369274A0A096LPK9 316 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 LOC102723532A0A0G2JNH3 316 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 TRBC2A0A5B9 178 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 TMX2-CTNND1H3BSU7 103 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 CAPN1P07384 714 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 CTSBP07858 339 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 HMOX2P30519 316 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 HNF4AP41235 474 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 PKNOX1P55347 436 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 VSX2P58304 361 aaPredicted RBP16.45■□□□□ 0.22
LIME1-208ENST00000493265 LAPTM5Q13571 262 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 ZRSR2Q15696 482 aaKnown RBP16.45■□□□□ 0.22
LIME1-208ENST00000493265 TBCCQ15814 346 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 ZC3H12BQ5HYM0 836 aaKnown RBP16.45■□□□□ 0.22
LIME1-208ENST00000493265 LIPJQ5W064 366 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 ADNP2Q6IQ32 1131 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 MED27Q6P2C8 311 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 TMIGD1Q6UXZ0 262 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 ATG14Q6ZNE5 492 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 OR4N4Q8N0Y3 316 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 D2HGDHQ8N465 521 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 DNAJC22Q8N4W6 341 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 L3MBTL4Q8NA19 623 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 OR6Y1Q8NGX8 325 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 METTL6Q8TCB7 284 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 CKAP2Q8WWK9 683 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 CCT6BQ92526 530 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 WDR34Q96EX3 536 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 OR6C1Q96RD1 312 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 MACROD1Q9BQ69 325 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 TRMOQ9BU70 441 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 C20orf27Q9GZN8 174 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 EHD1Q9H4M9 534 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 SYNPO2LQ9H987 977 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 TNFRSF12AQ9NP84 129 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 STARD5Q9NSY2 213 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 DKK4Q9UBT3 224 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 LOXL2Q9Y4K0 774 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 KLK4Q9Y5K2 254 aa16.45■□□□□ 0.22
LIME1-208ENST00000493265 PMS2P1A4D2B8 440 aa16.44■□□□□ 0.22
LIME1-208ENST00000493265 TMEM233B4DJY2 109 aa16.44■□□□□ 0.22
LIME1-208ENST00000493265 TMEM150CB9EJG8 249 aa16.44■□□□□ 0.22
LIME1-208ENST00000493265 HGSO14964 777 aaPredicted RBP16.44■□□□□ 0.22
LIME1-208ENST00000493265 SH3BGRLO75368 114 aa16.44■□□□□ 0.22
LIME1-208ENST00000493265 ESRRBO95718 433 aa16.44■□□□□ 0.22
LIME1-208ENST00000493265 CCL4P13236 92 aa16.44■□□□□ 0.22
LIME1-208ENST00000493265 SERPINB3P29508 390 aa16.44■□□□□ 0.22
LIME1-208ENST00000493265 SERPINB5P36952 375 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms