RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.66□□□□□ -1.02
HDAC3-212ENST00000492407 HHATQ5VTY9 493 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 TTC19Q6DKK2 380 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-212ENST00000492407 H3F3CQ6NXT2 135 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 CENPUQ71F23 418 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 LAPTM4BQ86VI4 370 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 SAMD14Q8IZD0 417 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-212ENST00000492407 METTL27Q8N6F8 245 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-212ENST00000492407 FAM76AQ8TAV0 307 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 BRIX1Q8TDN6 353 aaKnown RBP8.66□□□□□ -1.02
HDAC3-212ENST00000492407 METTL21AQ8WXB1 218 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 C8orf44Q96CB5 159 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 MMABQ96EY8 250 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-212ENST00000492407 RSRC1Q96IZ7 334 aaKnown RBP8.66□□□□□ -1.02
HDAC3-212ENST00000492407 TAAR6Q96RI8 345 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 PKP4Q99569 1192 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 DESI2Q9BSY9 194 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 PCBD2Q9H0N5 130 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 CHST11Q9NPF2 352 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 TMEM184CQ9NVA4 438 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 STMN3Q9NZ72 180 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 C6orf203Q9P0P8 240 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-212ENST00000492407 PTGFRNQ9P2B2 879 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 COPG2Q9UBF2 871 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 ZMAT5Q9UDW3 170 aaKnown RBP8.66□□□□□ -1.02
HDAC3-212ENST00000492407 C19orf25Q9UFG5 118 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-212ENST00000492407 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC3-212ENST00000492407 GUCA1BQ9UMX6 200 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 FER1L5A0AVI2 2057 aa8.66□□□□□ -1.02
HDAC3-212ENST00000492407 CRYBG3Q68DQ2 2970 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 LRBAP50851 2863 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 A0A0U1RQJ8 604 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 OR5H15A6NDH6 313 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 SDR42E2A6NKP2 422 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 ZG16O60844 167 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 NSA2O95478 260 aaKnown RBP8.65□□□□□ -1.02
HDAC3-212ENST00000492407 MLYCDO95822 493 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 SLC16A8O95907 504 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 C8orf89P0DMQ9 161 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 ZNF24P17028 368 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 CCND1P24385 295 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 ELAVL4P26378 380 aaKnown RBP8.65□□□□□ -1.02
HDAC3-212ENST00000492407 PTGER4P35408 488 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 AGTR2P50052 363 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 CASP6P55212 293 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 RPS15AP62244 130 aaKnown RBP8.65□□□□□ -1.02
HDAC3-212ENST00000492407 CRADDP78560 199 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 PCOLCEQ15113 449 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 HKDC1Q2TB90 917 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 KRTCAP3Q53RY4 240 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 ACSBG2Q5FVE4 666 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 ABHD17BQ5VST6 288 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 PLAG1Q6DJT9 500 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 NIPAL1Q6NVV3 410 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 SUSD1Q6UWL2 747 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 TMEM207Q6UWW9 146 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 CYHR1Q6ZMK1 362 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 PRUNE1Q86TP1 453 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 MYLK4Q86YV6 388 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-212ENST00000492407 ZC3H7AQ8IWR0 971 aaKnown RBP8.65□□□□□ -1.02
HDAC3-212ENST00000492407 REXO1L1PQ8IX06 675 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 LRRC56Q8IYG6 542 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-212ENST00000492407 PRSS58Q8IYP2 241 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 LGI4Q8N135 537 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 ZNF808Q8N4W9 903 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-212ENST00000492407 MCUQ8NE86 351 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 CALML6Q8TD86 181 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 ZNF480Q8WV37 535 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 MARVELD3Q96A59 401 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 ZNF354BQ96LW1 612 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 CYTH2Q99418 400 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 ACAT2Q9BWD1 397 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 YIPF2Q9BWQ6 316 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.65□□□□□ -1.02
HDAC3-212ENST00000492407 CCDC68Q9H2F9 335 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 XAB2Q9HCS7 855 aaKnown RBP8.65□□□□□ -1.02
HDAC3-212ENST00000492407 SYBUQ9NX95 663 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 DCAF16Q9NXF7 216 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 SAMD15Q9P1V8 674 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 TAC3Q9UHF0 121 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 MKL2Q9ULH7 1088 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 RUVBL2Q9Y230 463 aaKnown RBP8.65□□□□□ -1.02
HDAC3-212ENST00000492407 CRYL1Q9Y2S2 319 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 DHRS7Q9Y394 339 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 CREBBPQ92793 2442 aa8.65□□□□□ -1.02
HDAC3-212ENST00000492407 ANKRD12Q6UB98 2062 aa8.65□□□□□ -1.03
HDAC3-212ENST00000492407 NUP210LQ5VU65 1888 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 ABCA12Q86UK0 2595 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 A0A0A6YYC8 382 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 I3L1I5 382 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 SLC16A5O15375 505 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 NRP2O60462 931 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 WDPCPO95876 746 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 FGGP02679 453 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 YBX1P67809 324 aaKnown RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 MEF2AQ02078 507 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 THOC5Q13769 683 aaKnown RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 DHX34Q14147 1143 aaKnown RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 KCNJ11Q14654 390 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 EXT1Q16394 746 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms