RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 FER1L6-AS2Q96M78 137 aa23.45■■□□□ 1.34
UPF3A-209ENST00000492270 CRB3Q9BUF7 120 aa23.45■■□□□ 1.34
UPF3A-209ENST00000492270 DERL2Q9GZP9 239 aa23.45■■□□□ 1.34
UPF3A-209ENST00000492270 TRPC4Q9UBN4 977 aa23.45■■□□□ 1.34
UPF3A-209ENST00000492270 FBXL4Q9UKA2 621 aa23.45■■□□□ 1.34
UPF3A-209ENST00000492270 CDC14AQ9UNH5 594 aa23.45■■□□□ 1.34
UPF3A-209ENST00000492270 IGLV3-12A0A075B6K2 115 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 ANXA5P08758 320 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 CCDC166P0CW27 439 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 STMN1P16949 149 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 SLC26A3P40879 764 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 CCR8P51685 355 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 MAT1AQ00266 395 aaKnown RBP23.44■■□□□ 1.34
UPF3A-209ENST00000492270 CDKL1Q00532 357 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 ILF2Q12905 390 aaKnown RBP23.44■■□□□ 1.34
UPF3A-209ENST00000492270 ZKSCAN8Q15776 578 aaPredicted RBP23.44■■□□□ 1.34
UPF3A-209ENST00000492270 THOC6Q86W42 341 aaKnown RBP23.44■■□□□ 1.34
UPF3A-209ENST00000492270 SHISA5Q8N114 240 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 TEX19Q8NA77 164 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 CLEC1AQ8NC01 280 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 ZNF740Q8NDX6 193 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 ABHD11Q8NFV4 315 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 ZCCHC10Q8TBK6 192 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 TM4SF19Q96DZ7 209 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 YIPF2Q9BWQ6 316 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 GPR83Q9NYM4 423 aa23.44■■□□□ 1.34
UPF3A-209ENST00000492270 NCF1BA6NI72 391 aaPredicted RBP23.43■■□□□ 1.34
UPF3A-209ENST00000492270 NCF1CA8MVU1 366 aaPredicted RBP23.43■■□□□ 1.34
UPF3A-209ENST00000492270 NCF1P14598 390 aaPredicted RBP23.43■■□□□ 1.34
UPF3A-209ENST00000492270 CD1DP15813 335 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 SPRP35270 261 aaPredicted RBP23.43■■□□□ 1.34
UPF3A-209ENST00000492270 SLMAPQ14BN4 828 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 RBBP7Q16576 425 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 GRTP1Q5TC63 336 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 KIRREL2Q6UWL6 708 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 CMC1Q7Z7K0 106 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 ASPGQ86U10 573 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 LAPTM4BQ86VI4 370 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 MFSD9Q8NBP5 474 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 KCT2Q8NC54 265 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 OR4K1Q8NGD4 311 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 OR9A4Q8NGU2 314 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 SLC5A11Q8WWX8 675 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 THAP11Q96EK4 314 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 SEMA3GQ9NS98 782 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 SLC22A14Q9Y267 594 aa23.43■■□□□ 1.34
UPF3A-209ENST00000492270 CTAGE15A4D2H0 777 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 PRPF4O43172 522 aaKnown RBP eCLIP23.42■■□□□ 1.343e-7■■■□□ 17.1
UPF3A-209ENST00000492270 CTAGE8P0CG41 777 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 IL1RNP18510 177 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 GRK3P35626 688 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 RAB10P61026 200 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 FAM53BQ14153 422 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 NDUFA9Q16795 377 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 NADK2Q4G0N4 442 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 TMEM214Q6NUQ4 689 aaKnown RBP23.42■■□□□ 1.34
UPF3A-209ENST00000492270 CTAGE6Q86UF2 777 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 CTAGE4Q8IX94 777 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 GALNT16Q8N428 558 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 CAMKVQ8NCB2 501 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 SLC13A3Q8WWT9 602 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 MRRFQ96E11 262 aaKnown RBP23.42■■□□□ 1.34
UPF3A-209ENST00000492270 MOCOSQ96EN8 888 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 NINJ2Q9NZG7 142 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 C3orf18Q9UK00 162 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 DYRK1BQ9Y463 629 aa23.42■■□□□ 1.34
UPF3A-209ENST00000492270 OR1F1O43749 312 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 ZIC2O95409 532 aaPredicted RBP23.41■■□□□ 1.34
UPF3A-209ENST00000492270 IGHEP01854 428 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 GDF5P43026 501 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 CSHL1Q14406 222 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 TGFBIQ15582 683 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 OR4D1Q15615 310 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 FBXO48Q5FWF7 155 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 TMPRSS11BQ86T26 416 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 ZC3H7AQ8IWR0 971 aaKnown RBP23.41■■□□□ 1.34
UPF3A-209ENST00000492270 MNS1Q8NEH6 495 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 OR11G2Q8NGC1 345 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 NACC2Q96BF6 587 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 C8orf44Q96CB5 159 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 RHBDF1Q96CC6 855 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 ZNF451Q9Y4E5 1061 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 MAP4K5Q9Y4K4 846 aa23.41■■□□□ 1.34
UPF3A-209ENST00000492270 TRBC2A0A5B9 178 aa23.4■■□□□ 1.34
UPF3A-209ENST00000492270 IDSB3KWA1 339 aa23.4■■□□□ 1.34
UPF3A-209ENST00000492270 KIF2AO00139 706 aaPredicted RBP23.4■■□□□ 1.34
UPF3A-209ENST00000492270 AVPR1BP47901 424 aa23.4■■□□□ 1.34
UPF3A-209ENST00000492270 SLC6A12P48065 614 aa23.4■■□□□ 1.34
UPF3A-209ENST00000492270 EFNA3P52797 238 aa23.4■■□□□ 1.34
UPF3A-209ENST00000492270 NAB1Q13506 487 aa23.4■■□□□ 1.34
UPF3A-209ENST00000492270 TUBB8Q3ZCM7 444 aa23.4■■□□□ 1.34
UPF3A-209ENST00000492270 PDSS2Q86YH6 399 aa23.4■■□□□ 1.34
UPF3A-209ENST00000492270 UBXN10Q96LJ8 280 aa23.4■■□□□ 1.34
UPF3A-209ENST00000492270 SMAD5Q99717 465 aaKnown RBP23.4■■□□□ 1.34
UPF3A-209ENST00000492270 TMEM79Q9BSE2 394 aa23.4■■□□□ 1.34
UPF3A-209ENST00000492270 SARGQ9BW04 601 aa23.4■■□□□ 1.34
UPF3A-209ENST00000492270 MKKSQ9NPJ1 570 aaPredicted RBP23.4■■□□□ 1.34
UPF3A-209ENST00000492270 ATP13A2Q9NQ11 1180 aa23.4■■□□□ 1.34
UPF3A-209ENST00000492270 G3BP2Q9UN86 482 aaKnown RBP23.4■■□□□ 1.34
UPF3A-209ENST00000492270 UBR5O95071 2799 aaPredicted RBP23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms