RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 VN1R1Q9GZP7 353 aa8.43□□□□□ -1.06
HDAC3-211ENST00000491581 AICDAQ9GZX7 198 aa8.43□□□□□ -1.06
HDAC3-211ENST00000491581 TSPAN10Q9H1Z9 355 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-211ENST00000491581 ENAMQ9NRM1 1142 aa8.43□□□□□ -1.06
HDAC3-211ENST00000491581 ASIC3Q9UHC3 531 aa8.43□□□□□ -1.06
HDAC3-211ENST00000491581 SH3BGRL2Q9UJC5 107 aa8.43□□□□□ -1.06
HDAC3-211ENST00000491581 JRKLQ9Y4A0 524 aa8.43□□□□□ -1.06
HDAC3-211ENST00000491581 A0A0G2JN53 185 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 MYOCOSA0A1B0GUC4 107 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 WIPF3A6NGB9 483 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 A8MUI8 341 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 FAM227AF5H4B4 570 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 H3BMM5 538 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 CDC7O00311 574 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 DNALI1O14645 258 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 BMP10O95393 424 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 PIM1P11309 404 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 PRF1P14222 555 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 EZRP15311 586 aaKnown RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 NPPBP16860 134 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 GRNP28799 593 aaKnown RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 HNF4AP41235 474 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 NR0B1P51843 470 aaKnown RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 ARG2P78540 354 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 TEDDM1Q5T9Z0 273 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 YOD1Q5VVQ6 348 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 ADNP2Q6IQ32 1131 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 HIBCHQ6NVY1 386 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 PRMT9Q6P2P2 845 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 FJX1Q86VR8 437 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 KBTBD2Q8IY47 623 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 C17orf53Q8N3J3 647 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 SPATA6LQ8N4H0 392 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 KIF2BQ8N4N8 673 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 GPATCH11Q8N954 259 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 OR51Q1Q8NH59 317 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 MAGEC3Q8TD91 643 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 RERGQ96A58 199 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 CERS2Q96G23 380 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 IMMP1LQ96LU5 166 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 SIGLEC12Q96PQ1 595 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 SLC29A3Q9BZD2 475 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 DRC3Q9H069 523 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 CCDC68Q9H2F9 335 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 KLHL31Q9H511 634 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 XAB2Q9HCS7 855 aaKnown RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 PPANQ9NQ55 473 aaKnown RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 CCDC177Q9NQR7 707 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 SMYD2Q9NRG4 433 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 FAM114A2Q9NRY5 505 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 TRMT6Q9UJA5 497 aaKnown RBP8.42□□□□□ -1.06
HDAC3-211ENST00000491581 PYCARDQ9ULZ3 195 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 SNX12Q9UMY4 172 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 NAALAD2Q9Y3Q0 740 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 HIVEP3Q5T1R4 2406 aa8.42□□□□□ -1.06
HDAC3-211ENST00000491581 USP9YO00507 2555 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-211ENST00000491581 ZGRF1Q86YA3 2104 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 NPEPPSL1A6NEC2 478 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 AP3B1O00203 1094 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 TTI1O43156 1089 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 ZBTB14O43829 449 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 VPS26AO75436 327 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 SERPIND1P05546 499 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 ANXA5P08758 320 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 PGAM1P18669 254 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 GDF5P43026 501 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 XCR1P46094 333 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 TNFSF10P50591 281 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 TDGF1P3P51864 188 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 BTG2P78543 158 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 SARNPP82979 210 aaKnown RBP8.41□□□□□ -1.06
HDAC3-211ENST00000491581 ZNF33BQ06732 778 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 PTK6Q13882 451 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 ARHGAP19Q14CB8 494 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 CDSNQ15517 529 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 TTLL9Q3SXZ7 439 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 HECTD2Q5U5R9 776 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 ZNF468Q5VIY5 522 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-211ENST00000491581 TMEM214Q6NUQ4 689 aaKnown RBP8.41□□□□□ -1.06
HDAC3-211ENST00000491581 UGT3A1Q6NUS8 523 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 TMEM205Q6UW68 189 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 NDUFAF7Q7L592 441 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 MAMDC2Q7Z304 686 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-211ENST00000491581 ANKRD37Q7Z713 158 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 CEP97Q8IW35 865 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 BEST3Q8N1M1 668 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 FBXO15Q8NCQ5 510 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-211ENST00000491581 ACTRT1Q8TDG2 376 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 ANKRD49Q8WVL7 239 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 FAR1Q8WVX9 515 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 TM4SF19Q96DZ7 209 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 C5orf34Q96MH7 638 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 CYTH2Q99418 400 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 EBNA1BP2Q99848 306 aaKnown RBP8.41□□□□□ -1.06
HDAC3-211ENST00000491581 ZNF700Q9H0M5 742 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 EPS8L2Q9H6S3 715 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 CAB39LQ9H9S4 337 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 KLHL1Q9NR64 748 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 HOMER3Q9NSC5 361 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 NXT1Q9UKK6 140 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms