RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 CCDC166P0CW27 439 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 EMP2P54851 167 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 CDKL1Q00532 357 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 MEF2AQ02078 507 aaPredicted RBP12.5□□□□□ -0.41
SHC1-211ENST00000490667 AIMP2Q13155 320 aaKnown RBP12.5□□□□□ -0.41
SHC1-211ENST00000490667 MYBPC3Q14896 1274 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 TSNQ15631 228 aaKnown RBP12.5□□□□□ -0.41
SHC1-211ENST00000490667 NADK2Q4G0N4 442 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 CATSPEREQ5SY80 951 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 FRA10AC1Q70Z53 315 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 ADAMTSL2Q86TH1 951 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 ASPGQ86U10 573 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 THOC6Q86W42 341 aaKnown RBP12.5□□□□□ -0.41
SHC1-211ENST00000490667 HPS6Q86YV9 775 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 SPATA6LQ8N4H0 392 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 MMGT1Q8N4V1 131 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 PPM1NQ8N819 430 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 AMER3Q8N944 861 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 OR9A4Q8NGU2 314 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 SLC5A11Q8WWX8 675 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 GPR22Q99680 433 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 UNKQ9C0B0 810 aaKnown RBP12.5□□□□□ -0.41
SHC1-211ENST00000490667 TGIF2Q9GZN2 237 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 DERL2Q9GZP9 239 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 MKKSQ9NPJ1 570 aaPredicted RBP12.5□□□□□ -0.41
SHC1-211ENST00000490667 ZDHHC18Q9NUE0 388 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 C5AR2Q9P296 337 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 C3orf18Q9UK00 162 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 FBXL4Q9UKA2 621 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 SLC22A14Q9Y267 594 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 DYRK1BQ9Y463 629 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 MAP4K5Q9Y4K4 846 aa12.5□□□□□ -0.41
SHC1-211ENST00000490667 COL6A6A6NMZ7 2263 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 TRBC2A0A5B9 178 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 H0YIG0 161 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 FAM155BO75949 473 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 NSA2O95478 260 aaKnown RBP12.49□□□□□ -0.41
SHC1-211ENST00000490667 HEXBP07686 556 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 STMN1P16949 149 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 STX2P32856 288 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 HNMTP50135 292 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 SNRPNP63162 240 aaKnown RBP12.49□□□□□ -0.41
SHC1-211ENST00000490667 MAT1AQ00266 395 aaKnown RBP12.49□□□□□ -0.41
SHC1-211ENST00000490667 IGFBP7Q16270 282 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 SYT16Q17RD7 645 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 TUBB8Q3ZCM7 444 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 VWA5B1Q5TIE3 1220 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 ATG9BQ674R7 924 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 TMEM214Q6NUQ4 689 aaKnown RBP12.49□□□□□ -0.41
SHC1-211ENST00000490667 NXPE4Q6UWF7 544 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 PARP9Q8IXQ6 854 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 TBC1D19Q8N5T2 526 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 KCT2Q8NC54 265 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 ZNF740Q8NDX6 193 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 MNS1Q8NEH6 495 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 OR11G2Q8NGC1 345 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 NEIL2Q969S2 332 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 SARGQ9BW04 601 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 MFRPQ9BY79 579 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 ZNF552Q9H707 407 aaPredicted RBP12.49□□□□□ -0.41
SHC1-211ENST00000490667 C14orf105Q9NVL8 296 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 KCNE2Q9Y6J6 123 aa12.49□□□□□ -0.41
SHC1-211ENST00000490667 GCN1Q92616 2671 aaKnown RBP12.48□□□□□ -0.41
SHC1-211ENST00000490667 TTLL8A6PVC2 850 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 IDSB3KWA1 339 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 ALOX12BO75342 701 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 ALPPP05187 535 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 SLC35G6P0C7Q6 338 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 ACPPP15309 386 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 CD1DP15813 335 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 CXCR2P25025 360 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 ITGA3P26006 1051 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 GDF5P43026 501 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 MLLT10P55197 1068 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 RAB10P61026 200 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 ATP6V0D1P61421 351 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 FOXK1P85037 733 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 NAB1Q13506 487 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 TGFBIQ15582 683 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 ZKSCAN8Q15776 578 aaPredicted RBP12.48□□□□□ -0.41
SHC1-211ENST00000490667 C18orf21Q32NC0 220 aaPredicted RBP12.48□□□□□ -0.41
SHC1-211ENST00000490667 GPSM1Q86YR5 675 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 RBMXL3Q8N7X1 1067 aaKnown RBP12.48□□□□□ -0.41
SHC1-211ENST00000490667 C8orf44Q96CB5 159 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 RHBDF1Q96CC6 855 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 UBXN10Q96LJ8 280 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 TSNARE1Q96NA8 513 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 MESP1Q9BRJ9 268 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 CLMPQ9H6B4 373 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 PELI2Q9HAT8 420 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 ANKHQ9HCJ1 492 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 DMGDHQ9UI17 866 aaKnown RBP12.48□□□□□ -0.41
SHC1-211ENST00000490667 SLC22A7Q9Y694 548 aa12.48□□□□□ -0.41
SHC1-211ENST00000490667 BAHCC1Q9P281 2608 aa12.47□□□□□ -0.41
SHC1-211ENST00000490667 TLN1Q9Y490 2541 aaKnown RBP12.47□□□□□ -0.41
SHC1-211ENST00000490667 CTAGE15A4D2H0 777 aa12.47□□□□□ -0.41
SHC1-211ENST00000490667 NCF1BA6NI72 391 aaPredicted RBP12.47□□□□□ -0.41
SHC1-211ENST00000490667 NCF1CA8MVU1 366 aaPredicted RBP12.47□□□□□ -0.41
SHC1-211ENST00000490667 SGK494L7N484 410 aa12.47□□□□□ -0.41
SHC1-211ENST00000490667 KIF2AO00139 706 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms