RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 C10orf90Q96M02 699 aa6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 FOPNLQ96NB1 174 aa6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 SMAD5Q99717 465 aaKnown RBP6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 DPH2Q9BQC3 489 aaPredicted RBP6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 PLCD4Q9BRC7 762 aa6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 TRIM51Q9BSJ1 452 aa6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 DHRS4Q9BTZ2 278 aa6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 ATG10Q9H0Y0 220 aa6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 XAB2Q9HCS7 855 aaKnown RBP6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 MRPS30Q9NP92 439 aaKnown RBP6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 INTS7Q9NVH2 962 aaKnown RBP6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 INTS10Q9NVR2 710 aaKnown RBP6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 SAMD15Q9P1V8 674 aa6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 PLEKHB1Q9UF11 243 aaPredicted RBP6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 TAC3Q9UHF0 121 aa6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 KLK4Q9Y5K2 254 aa6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 HS3ST3B1Q9Y662 390 aa6.97□□□□□ -1.29
PRPF4B-208ENST00000490653 SPTBN1Q01082 2364 aaKnown RBP6.96□□□□□ -1.29
PRPF4B-208ENST00000490653 CENPEQ02224 2701 aa6.96□□□□□ -1.29
PRPF4B-208ENST00000490653 CSMD2Q7Z408 3487 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 A0A1B0GX78 115 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 OR2W5A6NFC9 320 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 VSTM2BA6NLU5 285 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 H3BMM5 538 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 H7BY64 318 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 HAT1O14929 419 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 TP73O15350 636 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 TTI1O43156 1089 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 KDM1AO60341 852 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 SRPX2O60687 465 aaPredicted RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 PIAS1O75925 651 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 SORBS2O94875 1100 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 KLHL18O94889 574 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 CLDN1O95832 211 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 SLC16A8O95907 504 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 CELA2AP08217 269 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 PAMP19021 973 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 IMPA1P29218 277 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 ATP5DP30049 168 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 CMPK1P30085 196 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 RPA3P35244 121 aaPredicted RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 CCNFP41002 786 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 ELK3P41970 407 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 FNTAP49354 379 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 ST13P50502 369 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 ARSFP54793 590 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 GNG11P61952 73 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 MAT1AQ00266 395 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 PRDX1Q06830 199 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 MRPL49Q13405 166 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 PTK6Q13882 451 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 GRM7Q14831 915 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 CRYMQ14894 314 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 PPP1R7Q15435 360 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 EIF2S3LQ2VIR3 472 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 C11orf91Q3C1V1 193 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 TEDDM1Q5T9Z0 273 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 RNF187Q5TA31 235 aaPredicted RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 ICE2Q659A1 982 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 FAAH2Q6GMR7 532 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 ZNF425Q6IV72 752 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 UBE2R2Q712K3 238 aaPredicted RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 PRSS41Q7RTY9 318 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 ANKMY2Q8IV38 441 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 GALNT16Q8N428 558 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 ARHGEF39Q8N4T4 335 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 CISD2Q8N5K1 135 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 TTC29Q8NA56 475 aaPredicted RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 C2CD4AQ8NCU7 369 aaPredicted RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 STT3BQ8TCJ2 826 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 MAGEC3Q8TD91 643 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 SEC14L1Q92503 715 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 ALKBH8Q96BT7 664 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 C8orf44Q96CB5 159 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 CFAP36Q96G28 342 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 PRAP1Q96NZ9 151 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 OR2A5Q96R48 311 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 OLFM1Q99784 485 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 EBNA1BP2Q99848 306 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 YIPF2Q9BWQ6 316 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 TRIM31Q9BZY9 425 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 ZNF304Q9HCX3 659 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 GPR83Q9NYM4 423 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 SPATA7Q9P0W8 599 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 ASIC3Q9UHC3 531 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 PCYOX1Q9UHG3 505 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 CDC23Q9UJX2 597 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 FBXL4Q9UKA2 621 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 SRPK3Q9UPE1 567 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 CHMP2BQ9UQN3 213 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 PDE10AQ9Y233 779 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 RUVBL1Q9Y265 456 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 NTNG1Q9Y2I2 539 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 ZNF451Q9Y4E5 1061 aa6.96□□□□□ -1.3
PRPF4B-208ENST00000490653 CRYBG3Q68DQ2 2970 aa6.95□□□□□ -1.3
PRPF4B-208ENST00000490653 A0A0A6YYC8 382 aaPredicted RBP6.95□□□□□ -1.3
PRPF4B-208ENST00000490653 FEZF1A0PJY2 475 aa6.95□□□□□ -1.3
PRPF4B-208ENST00000490653 CTAGE15A4D2H0 777 aa6.95□□□□□ -1.3
PRPF4B-208ENST00000490653 TCP11X1B4DZS4 312 aa6.95□□□□□ -1.3
PRPF4B-208ENST00000490653 I3L1I5 382 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms