RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 SULT1C3Q6IMI6 304 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 TCTN3Q6NUS6 607 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 COX15Q7KZN9 410 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 MRGPREQ86SM8 312 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 CLEC1AQ8NC01 280 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 OR4K1Q8NGD4 311 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 STT3BQ8TCJ2 826 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 NEIL2Q969S2 332 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 KIAA1191Q96A73 305 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 RHBDF1Q96CC6 855 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 TSNARE1Q96NA8 513 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 OR4K3Q96R72 315 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 CRB3Q9BUF7 120 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 SOX17Q9H6I2 414 aaPredicted RBP13.59□□□□□ -0.23
BRCA1-218ENST00000489037 ANKHQ9HCJ1 492 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 SEMA3GQ9NS98 782 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 TRPC4Q9UBN4 977 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 SH2B3Q9UQQ2 575 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 FASNP49327 2511 aaKnown RBP13.58□□□□□ -0.23
BRCA1-218ENST00000489037 TNRC6AQ8NDV7 1962 aaKnown RBP13.58□□□□□ -0.24
BRCA1-218ENST00000489037 A0A087WUV0 522 aaPredicted RBP13.58□□□□□ -0.24
BRCA1-218ENST00000489037 A0A0A6YYC8 382 aaPredicted RBP13.58□□□□□ -0.24
BRCA1-218ENST00000489037 H0YIG0 161 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 I3L1I5 382 aaPredicted RBP13.58□□□□□ -0.24
BRCA1-218ENST00000489037 CLGNO14967 610 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 P2RX6O15547 441 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 CNOT3O75175 753 aaKnown RBP13.58□□□□□ -0.24
BRCA1-218ENST00000489037 DNAJB5O75953 348 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 IPO13O94829 963 aaKnown RBP13.58□□□□□ -0.24
BRCA1-218ENST00000489037 WISP3O95389 354 aaPredicted RBP13.58□□□□□ -0.24
BRCA1-218ENST00000489037 MED26O95402 600 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 SERPIND1P05546 499 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 ZGLP1P0C6A0 271 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 RHOXF2BP0C7M4 288 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 GNAZP19086 355 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 MMP11P24347 488 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 TYK2P29597 1187 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 BCL6P41182 706 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 SERPINB9P50453 376 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 PGDP52209 483 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 SKP1P63208 163 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 RGS1Q08116 209 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 FAM83EQ2M2I3 478 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 ZXDCQ2QGD7 858 aaPredicted RBP13.58□□□□□ -0.24
BRCA1-218ENST00000489037 CATSPEREQ5SY80 951 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 CPZQ66K79 652 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 KLC3Q6P597 504 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 NXPE4Q6UWF7 544 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 SHISA6Q6ZSJ9 500 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 PRICKLE2Q7Z3G6 844 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 CMC1Q7Z7K0 106 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 TMPRSS11BQ86T26 416 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 PTRH1Q86Y79 214 aaKnown RBP13.58□□□□□ -0.24
BRCA1-218ENST00000489037 EXT2Q93063 718 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 UBXN10Q96LJ8 280 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 RHOXF2Q9BQY4 288 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 TRIM55Q9BYV6 548 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 MKKSQ9NPJ1 570 aaPredicted RBP13.58□□□□□ -0.24
BRCA1-218ENST00000489037 ATP13A2Q9NQ11 1180 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 C14orf105Q9NVL8 296 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 P4HTMQ9NXG6 502 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 CTSFQ9UBX1 484 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 NFU1Q9UMS0 254 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 TP53TG5Q9Y2B4 290 aa13.58□□□□□ -0.24
BRCA1-218ENST00000489037 PCDHGA9Q9Y5G4 932 aaKnown RBP13.58□□□□□ -0.24
BRCA1-218ENST00000489037 SCN2AQ99250 2005 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 DOCK10Q96BY6 2186 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 URADA6NGE7 173 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 A6NL46 340 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 VSTM2BA6NLU5 285 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 AGPSO00116 658 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 SLC28A2O43868 658 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 LCMT2O60294 686 aaKnown RBP13.57□□□□□ -0.24
BRCA1-218ENST00000489037 STK16O75716 305 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 NSA2O95478 260 aaKnown RBP13.57□□□□□ -0.24
BRCA1-218ENST00000489037 STATHP02808 62 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 UMODP07911 640 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 SLC35E2BP0CK96 405 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 TFEBP19484 476 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 AHRP35869 848 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 MSH2P43246 934 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 SERPINB8P50452 374 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 MEF2AQ02078 507 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-218ENST00000489037 CDC16Q13042 620 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 PWP1Q13610 501 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 BMPR2Q13873 1038 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 RBBP5Q15291 538 aaKnown RBP13.57□□□□□ -0.24
BRCA1-218ENST00000489037 OR4D1Q15615 310 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 IRAK1BP1Q5VVH5 260 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 NIPAL1Q6NVV3 410 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 ATG14Q6ZNE5 492 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 ASB18Q6ZVZ8 466 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 VN1R4Q7Z5H5 301 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 PPP1R32Q7Z5V6 425 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 KLHDC8AQ8IYD2 350 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 PRSS58Q8IYP2 241 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 KRT78Q8N1N4 520 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 DTWD1Q8N5C7 304 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 TEX19Q8NA77 164 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 TRPV3Q8NET8 790 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms